inria-00186568, version 3
Logol : Modelling evolving sequence families through a dedicated constrained string language
Catherine Belleannée
a, 1Jacques Nicolas b, 1
N° RR-6350 (2007)
Abstract: The report reviews the key milestones that have been reached so far in applying formal languages to the analysis of genomic sequences. Then it introduces a new modelling language, Logol, that aims at expressing more easily complex structures on genomic sequences. It is based on a development of String Variable Grammars, a formal framework proposed by D. Searls.
- a – Université Rennes I
- b – INRIA
- 1: SYMBIOSE (INRIA - IRISA)
- CNRS : UMR6074 – INRIA – INSA Rennes – Université de Rennes 1
- Domain : Computer Science/Bioinformatics
Life Sciences/Quantitative Methods - Internal note : RR-6350
- Available versions : v1 (2007-11-10) v2 (2007-11-13) v3 (2007-11-15)
- inria-00186568, version 3
- http://hal.inria.fr/inria-00186568
- oai:hal.inria.fr:inria-00186568
- From: Catherine Belleannée
- Submitted on: Thursday, 15 November 2007 09:02:31
- Updated on: Thursday, 15 November 2007 10:05:57
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