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Reports (Research Report) Year : 2007

Logol : Modelling evolving sequence families through a dedicated constrained string language

Abstract

The report reviews the key milestones that have been reached so far in applying formal languages to the analysis of genomic sequences. Then it introduces a new modelling language, Logol, that aims at expressing more easily complex structures on genomic sequences. It is based on a development of String Variable Grammars, a formal framework proposed by D. Searls.
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Dates and versions

inria-00186568 , version 1 (09-11-2007)
inria-00186568 , version 2 (13-11-2007)
inria-00186568 , version 3 (15-11-2007)

Identifiers

  • HAL Id : inria-00186568 , version 3

Cite

Catherine Belleannée, Jacques Nicolas. Logol : Modelling evolving sequence families through a dedicated constrained string language. [Research Report] RR-6350, INRIA. 2007, pp.19. ⟨inria-00186568v3⟩
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