inria-00436891, version 3
Topological Inference via Meshing
Benoît Hudson
a, 1Gary L. Miller
2Steve Y. Oudot
3Donald R. Sheehy
2
N° RR-7125 (2009)
Abstract: We apply ideas from mesh generation to improve the time and space complexities of computing the full persistent homological information associated with a point cloud $P$ in Euclidean space $\R^d$. Classical approaches rely on the \v Cech, Rips, $\alpha$-complex, or witness complex filtrations of $P$, whose complexities scale up very badly with $d$. For instance, the $\alpha$-complex filtration incurs the $n^{\Omega(d)}$ size of the Delaunay triangulation, where $n$ is the size of $P$. The common alternative is to truncate the filtrations when the sizes of the complexes become prohibitive, possibly before discovering the most relevant topological features. In this paper we propose a new collection of filtrations, based on the Delaunay triangulation of a carefully-chosen superset of $P$, whose sizes are reduced to $2^{O(d^2)}n$. A nice property of these filtrations is to be interleaved multiplicatively with the family of offsets of $P$, so that the persistence diagram of $P$ can be approximated in $2^{O(d^2)}n^3$ time in theory, with a near-linear observed running time in practice (ignoring the constant factors depending exponentially on $d$). Thus, our approach remains tractable in medium dimensions, say 4 to 10.
- a – Toyota Technological Institute - Chicago
- 1: Toyota Technological Institute
- Toyota Technological Institute - Chicago
- 2: Computer Science Department - Carnegie Mellon University
- University of Pittsburgh
- 3: GEOMETRICA (INRIA Sophia Antipolis / INRIA Saclay - Ile de France)
- INRIA
- Domain : Computer Science/Computational Geometry
- Keywords : Topological persistence – Delaunay triangulation – offsets – sparse Voronoi refinement
- Internal note : RR-7125
- Available versions : v1 (2009-12-01) v2 (2009-12-02) v3 (2009-12-03)
- inria-00436891, version 3
- http://hal.inria.fr/inria-00436891
- oai:hal.inria.fr:inria-00436891
- From: Steve Oudot
- Submitted on: Thursday, 3 December 2009 09:31:21
- Updated on: Tuesday, 22 December 2009 13:34:07






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