Joint T1 and Brain Fiber Log-Demons Registration Using Currents to Model Geometry

Viviana Siless; Joan Glaunès; Pamela Guevara; Jean-François Mangin; Cyril Poupon; Denis Le Bihan; Bertrand Thirion; Pierre Fillard

hal-00723367, version 1

Joint T1 and Brain Fiber Log-Demons Registration Using Currents to Model Geometry

Viviana Siless () ^1, 2, Joan Glaunès^a^, 3, Pamela Guevara ¹, Jean-François Mangin ¹, Cyril Poupon ⁴, Denis Le Bihan ⁵, Bertrand Thirion ^1, 2, Pierre Fillard ²

MICCAI (2012)

Abstract: We present an extension of the diffeomorphic Geometric Demons algorithm which combines the iconic registration with geometric constraints. Our algorithm works in the log-domain space, so that one can efficiently compute the deformation field of the geometry. We represent the shape of objects of interest in the space of currents which is sensitive to both location and geometric structure of objects. Currents provides a distance between geometric structures that can be defined without specifying explicit point-to-point correspondences. We demonstrate this framework by registering simultaneously T1 images and 65 fiber bundles consistently extracted in 12 subjects and compare it against non-linear T1, tensor, and multi-modal T1+ Fractional Anisotropy (FA) registration algorithms. Results show the superiority of the Log-domain Geometric Demons over their purely iconic counterparts.

a – MAP5, CNRS UMR 8145, Université Paris Descartes, 75006 Paris, France
1: Laboratoire de Neuroimagerie Assistée par Ordinateur (LNAO)
CEA : DSV/I2BM/NEUROSPIN
2: PARIETAL (INRIA Saclay - Ile de France)
INRIA
3: Mathématiques appliquées Paris 5 (MAP5)
CNRS : UMR8145 – Université Paris V - Paris Descartes
4: Laboratoire d'Imagerie et de Spectroscopie (LRMN)
CEA : DSV/I2BM/NEUROSPIN
5: Service NEUROSPIN (NEUROSPIN)
CEA : DSV/I2BM

hal-00723367, version 1
http://hal.inria.fr/hal-00723367
oai:hal.inria.fr:hal-00723367
From: Viviana Siless <>
Submitted on: Thursday, 9 August 2012 13:02:42
Updated on: Thursday, 9 August 2012 21:34:14

See detailed view

Associated documents

PDF :

Export

Bibtex EndNote TEI RefWorks

<?xml version="1.0" encoding="UTF-8"?>
<listBibl xmlns="http://www.tei-c.org/ns/1.0" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML">
<listBibl type="inproceedings"><head>Peer-reviewed conferences/proceedings</head>
<biblStruct type="inproceedings" xml:id="hal-00723367"><analytic>
<author><persName><forename>Viviana</forename><surname>Siless</surname></persName>
<affiliation>
<orgName type="laboratory">LNAO</orgName>
<orgName type="team">Laboratoire de Neuroimagerie Assistée par Ordinateur</orgName>
<country>FR</country>
<orgName type="institution">CEA : DSV/I2BM/NEUROSPIN</orgName>
</affiliation>
<affiliation>
<orgName type="laboratory">INRIA Saclay - Ile de France</orgName>
<orgName type="team">PARIETAL</orgName>
<country>FR</country>
<orgName type="institution">INRIA</orgName>
</affiliation>
</author>
<author><persName><forename>Joan</forename><surname>Glaunès</surname></persName>
<affiliation>
<orgName type="laboratory">MAP5</orgName>
<orgName type="team">Mathématiques appliquées Paris 5</orgName>
<country>FR</country>
<orgName type="institution">CNRS : UMR8145</orgName>
<orgName type="institution">Université Paris V - Paris Descartes</orgName>
</affiliation>
</author>
<author><persName><forename>Pamela</forename><surname>Guevara</surname></persName>
<affiliation>
<orgName type="laboratory">LNAO</orgName>
<orgName type="team">Laboratoire de Neuroimagerie Assistée par Ordinateur</orgName>
<country>FR</country>
<orgName type="institution">CEA : DSV/I2BM/NEUROSPIN</orgName>
</affiliation>
</author>
<author><persName><forename>Jean-François</forename><surname>Mangin</surname></persName>
<affiliation>
<orgName type="laboratory">LNAO</orgName>
<orgName type="team">Laboratoire de Neuroimagerie Assistée par Ordinateur</orgName>
<country>FR</country>
<orgName type="institution">CEA : DSV/I2BM/NEUROSPIN</orgName>
</affiliation>
</author>
<author><persName><forename>Cyril</forename><surname>Poupon</surname></persName>
<affiliation>
<orgName type="laboratory">LRMN</orgName>
<orgName type="team">Laboratoire d'Imagerie et de Spectroscopie</orgName>
<country>FR</country>
<orgName type="institution">CEA : DSV/I2BM/NEUROSPIN</orgName>
</affiliation>
</author>
<author><persName><forename>Denis</forename><surname>Le Bihan</surname></persName>
<affiliation>
<orgName type="laboratory">NEUROSPIN</orgName>
<orgName type="team">Service NEUROSPIN</orgName>
<country>FR</country>
<orgName type="institution">CEA : DSV/I2BM</orgName>
</affiliation>
</author>
<author><persName><forename>Bertrand</forename><surname>Thirion</surname></persName>
<affiliation>
<orgName type="laboratory">LNAO</orgName>
<orgName type="team">Laboratoire de Neuroimagerie Assistée par Ordinateur</orgName>
<country>FR</country>
<orgName type="institution">CEA : DSV/I2BM/NEUROSPIN</orgName>
</affiliation>
<affiliation>
<orgName type="laboratory">INRIA Saclay - Ile de France</orgName>
<orgName type="team">PARIETAL</orgName>
<country>FR</country>
<orgName type="institution">INRIA</orgName>
</affiliation>
</author>
<author><persName><forename>Pierre</forename><surname>Fillard</surname></persName>
<affiliation>
<orgName type="laboratory">INRIA Saclay - Ile de France</orgName>
<orgName type="team">PARIETAL</orgName>
<country>FR</country>
<orgName type="institution">INRIA</orgName>
</affiliation>
</author>
<title type="main" level="a">Joint T1 and Brain Fiber Log-Demons Registration Using Currents to Model Geometry</title></analytic><monogr><meeting>MICCAI</meeting><imprint><pubPlace><settlement>Nice, France</settlement><country>France</country></pubPlace><biblScope type="publicationDate">2012-10-01</biblScope></imprint></monogr><idno type="HALid">http://hal.inria.fr/hal-00723367</idno><idno type="HALFile">http://hal.inria.fr/hal-00723367/PDF/75110057.pdf</idno></biblStruct>
</listBibl>
</listBibl>