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Artificial Intelligence Applications and Innovations AIAI 2012 International Workshops: AIAB, AIeIA, CISE, COPA, IIVC, ISQL, MHDW, and WADTMB Halkidiki, Greece, September 27-30, 2012, Part II |
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Conference papers
DISCO: A New Algorithm for Detecting 3D Protein Structure Similarity
Abstract : Protein structure similarity is one of the most important aims pursued by bioinformatics and structural biology, nowadays. Although quite a few similarity methods have been proposed lately, yet fresh algorithms that fulfill new preconditions are needed to serve this purpose. In this paper, we provide a new similarity measure for 3D protein structures that detects not only similar structures but also similar substructures to a query protein, supporting both multiple and pairwise comparison procedures and combining many comparison characteristics. In order to handle similarity queries we utilize efficient and effective indexing techniques such as M-trees and we provide interesting results using real, previously tested protein data sets.
Keywords :
protein structure similarity
indexing technique
Cited literature [19 references]
https://hal.archives-ouvertes.fr/hal-01523057
Contributor : Hal Ifip <>
Submitted on : Tuesday, May 16, 2017 - 9:16:55 AM
Last modification on : Thursday, March 5, 2020 - 5:41:43 PM
Long-term archiving on: : Friday, August 18, 2017 - 12:44:27 AM
Contributor : Hal Ifip <>
Submitted on : Tuesday, May 16, 2017 - 9:16:55 AM
Last modification on : Thursday, March 5, 2020 - 5:41:43 PM
Long-term archiving on: : Friday, August 18, 2017 - 12:44:27 AM
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