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RNA-seq without a reference genome: a comparison of the mapping and the assembly approaches

M.-C. Carpentier J. Charif Vincent Lacroix 1 Marie-France Sagot 1, * Fabrice Vavre 2
* Corresponding author
1 BAMBOO - An algorithmic view on genomes, cells, and environments
LBBE - Laboratoire de Biométrie et Biologie Evolutive - UMR 5558, Inria Grenoble - Rhône-Alpes
2 Génétique et évolution des interactions hôtes-parasites
GINSENG - Département génétique, interactions et évolution des génomes [LBBE]
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https://hal.inria.fr/hal-00748612
Contributor : Marie-France Sagot <>
Submitted on : Monday, November 5, 2012 - 4:06:04 PM
Last modification on : Tuesday, July 20, 2021 - 5:20:05 PM

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  • HAL Id : hal-00748612, version 1

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M.-C. Carpentier, J. Charif, Vincent Lacroix, Marie-France Sagot, Fabrice Vavre. RNA-seq without a reference genome: a comparison of the mapping and the assembly approaches. JOBIM, 2011, Paris, France. ⟨hal-00748612⟩

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