Barcoding of Plants and Fungi, Science, vol.325, issue.5941, pp.682-683, 2009. ,
DOI : 10.1126/science.1176906
The molecular revolution in ectomycorrhizal ecology: peeking into the black-box, Molecular Ecology, vol.144, issue.8, pp.1855-1871, 2001. ,
DOI : 10.1046/j.0962-1083.2001.01333.x
Progress towards DNA barcoding of fungi, Molecular Ecology Resources, vol.9, issue.Suppl. 1, pp.83-89, 2009. ,
DOI : 10.1111/j.1755-0998.2009.02635.x
Evidence that chytrids dominate fungal communities in high-elevation soils, Proceeding of the National Academy of Sciences, pp.10618315-18320, 2009. ,
DOI : 10.1073/pnas.0907303106
High diversity of fungi in air particulate matter, Proceeding of the National Academy of Sciences, pp.12814-12819, 2009. ,
DOI : 10.1073/pnas.0811003106
Spatial separation of litter decomposition and mycorrhizal nitrogen uptake in a boreal forest, New Phytologist, vol.151, issue.3, pp.611-620, 2007. ,
DOI : 10.1111/j.1469-8137.2006.01936.x
Fungal Community Analysis by Large-Scale Sequencing of Environmental Samples, Applied and Environmental Microbiology, vol.71, issue.9, pp.5544-5550, 2005. ,
DOI : 10.1128/AEM.71.9.5544-5550.2005
Spatial and temporal ecology of Scots pine ectomycorrhizas, New Phytologist, vol.114, issue.3, 2010. ,
DOI : 10.1111/j.1469-8137.2010.03204.x
Assessment of Microbial Communities by Graph Partitioning in a Study of Soil Fungi in Two Alpine Meadows, Applied and Environmental Microbiology, vol.75, issue.18, pp.5863-5870, 2009. ,
DOI : 10.1128/AEM.00748-09
The ITS region as a target for characterization of fungal communities using emerging sequencing technologies, FEMS Microbiology Letters, vol.296, issue.1, pp.97-101, 2009. ,
DOI : 10.1111/j.1574-6968.2009.01618.x
Taxonomic Reliability of DNA Sequences in Public Sequence Databases: A Fungal Perspective, PLoS ONE, vol.2, issue.1, p.59, 2006. ,
DOI : 10.1371/journal.pone.0000059.s001
Organization of ribosomal DNA in the basidiomycete Thanatephorus praticola, Current Genetics, vol.7, issue.3, pp.277-280, 1990. ,
DOI : 10.1007/BF00318394
Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity, New Phytologist, vol.2, pp.454449-456, 2009. ,
Characterization of the Oral Fungal Microbiome (Mycobiome) in Healthy Individuals, PLoS Pathogens, vol.42, issue.1, p.1000713, 2010. ,
DOI : 10.1371/journal.ppat.1000713.s003
phyllosphere, New Phytologist, vol.7, issue.2, pp.438-448, 2009. ,
DOI : 10.1111/j.1469-8137.2009.02990.x
Massively parallel 454- sequencing of Quercus spp. ectomycorrhizosphere indicates differences in fungal community composition richness, and diversity among urban and rural environments, Molecular Ecology, 2010. ,
ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts, Molecular Ecology, vol.57, issue.2, pp.113-118, 1993. ,
DOI : 10.1093/nar/17.16.6749
Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR-protocols a guide to methods and applications Edited by Academic press, pp.315-322, 1990. ,
Fugal-specific primers developed for analysis of the ITS region of environmental DNA extracts, BMC Microbiology, vol.5, issue.1, p.28, 2005. ,
DOI : 10.1186/1471-2180-5-28
Ainsworth and Bisby's Dictionary of the Fungi, Wallingford UK: CAB International, 2001. ,
Quantification of damage in DNA recovered from highly degraded samples -a case study on DNA in faeces, Frontiers in Zoology, vol.3, issue.1, p.11, 2006. ,
DOI : 10.1186/1742-9994-3-11
An In silico approach for the evaluation of DNA barcodes, BMC Genomics, vol.11, issue.1 ,
DOI : 10.1186/1471-2164-11-434
Agrep-a fast approximate pattern matching tool, Proceedings of the Winter 1992 USENIX Conference, pp.153-162, 1992. ,
Reconstructing the early evolution of Fungi using a six-gene phylogeny, Nature, vol.18, issue.7113, pp.818-822, 2006. ,
DOI : 10.1038/nature05110
The Thermodynamics of DNA Structural Motifs, Annual Review of Biophysics and Biomolecular Structure, vol.33, issue.1, pp.415-440, 2004. ,
DOI : 10.1146/annurev.biophys.32.110601.141800
PrimerHunter: a primer design tool for PCR-based virus subtype identification, Nucleic Acids Research, vol.37, issue.8, pp.2483-2492, 2009. ,
DOI : 10.1093/nar/gkp073
Potential link between plant and fungal distributions in a dipterocarp rainforest: community and phylogenetic structure of tropical ectomycorrhizal fungi across a plant and soil ecotone, New Phytologist, vol.6, issue.2, pp.529-542, 2010. ,
DOI : 10.1111/j.1469-8137.2009.03075.x
Can you bank on GenBank? Trends in Ecology and Evolution, pp.317-319, 2003. ,
Molecular Identification of Ectomycorrhizal Mycelium in Soil Horizons, Applied and Environmental Microbiology, vol.69, issue.1, 2003. ,
DOI : 10.1128/AEM.69.1.327-333.2003
Spatial distribution of fungal communities in a coastal grassland soil, Soil Biology and Biochemistry, vol.41, issue.2, pp.414-416, 2009. ,
DOI : 10.1016/j.soilbio.2008.10.021
Polymerase chain reaction primers miss half of rRNA microbial diversity. The ISME shopping, pp.1365-1373, 2009. ,
Environmental rRNA inventories miss over half of protistan diversity, BMC Microbiology, vol.8, issue.1, p.222, 2008. ,
DOI : 10.1186/1471-2180-8-222
Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis, FEMS Microbiology Ecology, vol.60, issue.2, pp.341-350, 2007. ,
DOI : 10.1111/j.1574-6941.2007.00283.x
Experimental factors affecting PCR-based estimates of microbial species richness and evenness. The International Society for Microbial Ecology Journal, 2010. ,
Effect of PCR amplicon size on assessments of clone library microbial diversity and community structure, Environmental Microbiology, vol.21, issue.5, pp.1292-1302, 2009. ,
DOI : 10.1111/j.1462-2920.2008.01857.x