I. Smal, W. Niessen, and E. Meijering, ADVANCED PARTICLE FILTERING FOR MULTIPLE OBJECT TRACKING IN DYNAMIC FLUORESCENCE MICROSCOPY IMAGES, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, pp.1048-1051, 2007.
DOI : 10.1109/ISBI.2007.357035

A. Genovesio, T. Liedl, V. Emiliani, W. J. Parak, M. Coppey-moisan et al., Multiple particle tracking in 3D+t microscopy: Method and application to the tracking of endocytosed quantum dots, IEEE Trans. on IP, vol.15, issue.5, pp.1062-1070, 2006.

L. Cortés and Y. Amit, Efficient detection and tracking of multiple vesicles in video microscopy, 2007.

V. Racine, M. Saschse, J. Salamero, V. Fraisier, A. Trubuil et al., Visualization and quantification of vesicle trafficking on a 3D cytoskeleton network in living cells, Journal of Microscopy, pp.214-228, 2007.

D. Thomann, J. Dorn, P. K. Sorger, and G. Danuser, Automatic fluorescent tag localization II: improvement in super-resolution by relative tracking, Journal of Microscopy, vol.208, issue.3, pp.230-248, 2003.
DOI : 10.1046/j.1365-2818.2003.01223.x

J. F. Dorn, K. Jaqaman, D. R. Rines, G. S. Jelson, P. K. Sorger et al., Yeast Kinetochore Microtubule Dynamics Analyzed by High-Resolution Three-Dimensional Microscopy, Biophysical Journal, vol.89, issue.4, pp.2835-2854, 2005.
DOI : 10.1529/biophysj.104.058461

M. Szummer, P. Kohli, and D. Hoiem, Learning CRFs Using Graph Cuts, Proc. of ECCV'2008, pp.582-595, 2008.
DOI : 10.1007/978-3-540-88688-4_43

J. Lafferty, A. Mccallum, and F. Pereira, Conditional random fields: Probabilistic models for segmenting and labeling sequence data, Proceedings of International Conference on Machine Learning, pp.282-289, 2001.

T. Pécot, C. Kervrann, S. Bardin, B. Goud, and J. Salamero, Patch-Based Markov Models for Event Detection in Fluorescence Bioimaging, Int. Conf. on Med
DOI : 10.1007/978-3-540-85990-1_12

Y. Boykov and V. Kolmogorov, An experimental comparison of min-cut/max- flow algorithms for energy minimization in vision, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.26, issue.9, pp.1124-1137, 2004.
DOI : 10.1109/TPAMI.2004.60

J. Boulanger, C. Kervrann, and P. Bouthemy, A simulation and estimation framework for intracellular dynamics and trafficking in video-microscopy and fluorescence imagery, Medical Image Analysis, vol.13, issue.1, pp.132-142, 2009.
DOI : 10.1016/j.media.2008.06.017

URL : https://hal.archives-ouvertes.fr/hal-00794917

T. Crivelli, G. Piriou, B. Cernuschi-frias, P. Bouthemy, and J. F. Yao, Simultaneous motion detection and background reconstruction with mixed-state conditional Markov random field, Proc. of ECCV
URL : https://hal.archives-ouvertes.fr/hal-00651558