H. Allende, A. Frery, J. Galbiati, and L. Pizarro, M-estimators with asymmetric influence functions: the distribution case, Journal of Statistical Computation and Simulation, vol.34, issue.11, pp.941-946, 2006.
DOI : 10.1016/S0167-9473(02)00078-6

C. Anderson, G. Georgiou, I. Morrison, G. Stevenson, and R. Cherry, Tracking of cell surface receptors by fluorescence digital imaging microscopy using a charged-coupled device camera. low-density lipoprotein and influenza virus receptor mobility at 4 degrees c, Journal of Cell Science, vol.101, pp.415-425, 1992.

J. L. Barron, D. J. Fleet, and S. S. Beauchemin, Performance of optical flow techniques, International Journal of Computer Vision, vol.54, issue.1, pp.43-77, 1994.
DOI : 10.1007/BF01420984

L. Birgé and P. Massart, Gaussian model selection, Journal of the European Mathematical Society, vol.3, issue.3, pp.203-268, 2001.
DOI : 10.1007/s100970100031

M. Black, G. Sapiro, D. Marimont, and D. Heeger, Robust anisotropic diffusion, IEEE Transactions on Image Processing, vol.7, issue.3, pp.421-432, 1998.
DOI : 10.1109/83.661192

S. Bonneau, M. Dahan, and L. D. Cohen, Tracking Single Quantum Dots in Live Cells with Minimal Paths, 2005 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'05), Workshops, pp.141-149, 2005.
DOI : 10.1109/CVPR.2005.546

J. Boulanger, C. Kervrann, and P. Bouthemy, Space-Time Adaptation for Patch-Based Image Sequence Restoration, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.29, issue.6, pp.1096-1102, 2007.
DOI : 10.1109/TPAMI.2007.1064

URL : https://hal.archives-ouvertes.fr/inria-00071294

J. Boulanger, J. Sibarita, C. Kervrann, and P. Bouthemy, onparametric regression for patch-based fluoresence microscopy image sequence denoising, Proc. IEEE Int. Symp. on Biomedical Imaging: from nano to macro (ISBI'08), 2008.

E. W. Dijkstra, A note on two problems in connexion with graphs, Numerische Mathematik, vol.4, issue.1, pp.269-271, 1959.
DOI : 10.1007/BF01386390

C. Ercole, A. Foi, V. Katkovnik, and K. Egiazarian, Spatio-temporal pointwise adaptive denoising in video: 3D non parametric approach, Proc. of 1st International Workshop on Video Processing and Quality Metrics for Consumer Electronics, 2005.

T. Gasser, L. Sroka, and C. Jennen-steinmetz, Residual variance and residual pattern in nonlinear regression, Biometrika, vol.73, issue.3, pp.625-633, 1986.
DOI : 10.1093/biomet/73.3.625

A. Genovesio, T. Liedl, V. Emiliani, W. J. Parak, M. Coppey-moisan et al., Multiple particle tracking in 3-D+t microscopy: method and application to the tracking of endocytosed quantum dots, IEEE Transactions on Image Processing, vol.15, issue.5, pp.1062-1070, 2006.
DOI : 10.1109/TIP.2006.872323

F. Gibbons, J. Chauwin, M. Despósito, and J. José, A Dynamical Model of Kinesin-Microtubule Motility Assays, Biophysical Journal, vol.80, issue.6, pp.2515-2526, 2001.
DOI : 10.1016/S0006-3495(01)76223-6

S. Hadjidemetriou, D. Toomre, and J. S. Duncan, Tracking the motion of the outer tips of microtubules, Proc. IEEE Int. Symp. on Biomedical Imaging: From Nano to Macro (ISBI'2006, pp.530-533, 2006.

P. J. Huber, Robust Statistics, 1981.
DOI : 10.1002/0471725250

S. Huet, Model selection for estimating the non zero components of a Gaussian vector, ESAIM: Probability and Statistics, vol.10, pp.164-183, 2006.
DOI : 10.1051/ps:2006004

S. Ieng, J. Tarel, and P. Charbonnier, Evaluation of Robust Fitting Based Detection, Proc. 8th Eur. Conf. on Computer Vision, pp.341-352, 2004.
DOI : 10.1007/978-3-540-24671-8_27

M. Jacob and M. Unser, Design of steerable filters for feature detection using canny-like criteria, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.26, issue.8, pp.1007-1019, 2004.
DOI : 10.1109/TPAMI.2004.44

C. Kervrann and J. Boulanger, Optimal Spatial Adaptation for Patch-Based Image Denoising, IEEE Transactions on Image Processing, vol.15, issue.10, pp.2866-2878, 2006.
DOI : 10.1109/TIP.2006.877529

O. Lepski, Asymptotically minimax adaptive estimation 1: upper bounds, SIAM Journal Theory of Probability and Application, vol.36, issue.4, pp.654-659, 1991.

K. Li, M. Chen, and T. Kanade, Cell population tracking and lineage construction with spatiotemporal context, Proc. 10th International Conference on Medical Image Computing and Computer Assisted Intervention, pp.295-302, 2007.

M. Maurizot, P. Bouthemy, B. Delyon, A. Iouditski, and J. Odobez, Determination of singular points in 2D deformable flow fields, Proceedings., International Conference on Image Processing, pp.488-491, 1995.
DOI : 10.1109/ICIP.1995.537678

F. Nédélec, Computer simulations reveal motor properties generating stable antiparallel microtubule interactions, The Journal of Cell Biology, vol.6, issue.24, pp.1005-1015, 2001.
DOI : 10.1038/35050669

J. Portilla, V. Strela, M. Wainwright, and E. Simoncelli, Image denoising using scale mixtures of gaussians in the wavelet domain, IEEE Transactions on Image Processing, vol.12, issue.11, pp.1338-1351, 2003.
DOI : 10.1109/TIP.2003.818640

T. Pécot, J. Boulanger, C. Kervrann, and P. Bouthemy, NETWORK TOMOGRAPHY FOR TRAFFICKING SIMULATION AND ANALYSIS IN FLUORESCENCE MICROSCOPY IMAGING, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, pp.268-271, 2007.
DOI : 10.1109/ISBI.2007.356840

T. Pécot, C. Kervrann, and P. Bouthemy, Minimal paths and probabilistic models for origin-destination traffic estimation in live cell imaging, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008.
DOI : 10.1109/ISBI.2008.4541128

V. Racine, A. Hertzog, J. Jouaneau, J. Salamero, C. Kervrann et al., Multiple-Target Tracking of 3D Fluorescent Objects Based on Simulated Annealing, 3rd IEEE International Symposium on Biomedical Imaging: Macro to Nano, 2006., pp.1020-1023, 2006.
DOI : 10.1109/ISBI.2006.1625094

A. Ruckstuhl, M. Jacobson, R. Field, and J. Dodd, Baseline subtraction using robust local regression estimation, Journal of Quantitative Spectroscopy and Radiative Transfer, vol.68, issue.2, pp.179-193, 2001.
DOI : 10.1016/S0022-4073(00)00021-2

I. Sbalzarini and P. Koumoutsakos, Feature point tracking and trajectory analysis for video imaging in cell biology, Journal of Structural Biology, vol.151, issue.2, pp.182-195, 2005.
DOI : 10.1016/j.jsb.2005.06.002

J. Sibarita, H. Magnin, and J. R. De-mey, Ultra-fast 4D microscopy and high throughput distributed deconvolution, Proceedings IEEE International Symposium on Biomedical Imaging, pp.769-772, 2002.
DOI : 10.1109/ISBI.2002.1029371

J. Sibarita, V. Racine, and J. Salamero, Quantification of Membrane Trafficking on a 3D Cytoskeleton Network in Living Cells, 3rd IEEE International Symposium on Biomedical Imaging: Macro to Nano, 2006., pp.263-266, 2006.
DOI : 10.1109/ISBI.2006.1624903

I. Smal, K. Draegestein, N. Galjart, W. Niessen, and E. Meijering, Raoblackwellized marginal particle filtering for multiple object tracking in molecular bioimaging, pp.110-121, 2007.

S. Soatto, G. Doretto, and Y. N. Wu, Dynamic textures, Proceedings Eighth IEEE International Conference on Computer Vision. ICCV 2001, pp.439-446, 2001.
DOI : 10.1109/ICCV.2001.937658

C. Steger and . Feb, An unbiased detector of curvilinear structures, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.20, issue.2, pp.113-125, 1998.
DOI : 10.1109/34.659930

T. Surrey, F. Nédélec, S. Leibler, and E. Karenti, Physical Properties Determining Self-Organization of Motors and Microtubules, Science, vol.292, issue.5519, pp.1167-1171, 2001.
DOI : 10.1126/science.1059758

D. Thomann, J. Dorn, P. Sorger, and G. Danuser, Automatic fluorescent tag localization II: improvement in super-resolution by relative tracking, Journal of Microscopy, vol.208, issue.3, pp.230-248, 2003.
DOI : 10.1046/j.1365-2818.2003.01223.x

Y. Wang and S. C. Zhu, Modeling textured motion: Particle, wave and sketch, Proc. 9th IEEE Int. Conf. on Computer Vision (ICCV'2003, pp.213-220, 2003.

J. White, L. Johannes, F. Mallar, A. Girod, G. Stephan et al., Rab6 Coordinates a Novel Golgi to ER Retrograde Transport Pathway in Live Cells, The Journal of Cell Biology, vol.112, issue.4, pp.743-760, 1999.
DOI : 10.1083/jcb.143.6.1505

B. Zhang, J. Enninga, J. Olivo-marin, and C. Zimmer, Automated Super-Resolution Detection of Fluorescent Rods in 2D, 3rd IEEE International Symposium on Biomedical Imaging: Macro to Nano, 2006., pp.1296-1299, 2006.
DOI : 10.1109/ISBI.2006.1625163