Numerical Methods for Image Registration (Numerical Mathematics and Scientific Computation), 2004. ,
Simultaneous Registration and Parcellation of Bilateral Hippocampal Surface Pairs for Local Asymmetry Quantification, IEEE Transactions on Medical Imaging, vol.26, issue.4, pp.471-478, 2007. ,
DOI : 10.1109/TMI.2007.892502
Computational anatomy: an emerging discipline, Quarterly of Applied Mathematics, vol.56, issue.4, pp.617-694, 1998. ,
DOI : 10.1090/qam/1668732
General pattern theory, 1994. ,
Detection and Mapping of Abnormal Brain Structure with a Probabilistic Atlas of Cortical Surfaces, Journal of Computer Assisted Tomography, vol.21, issue.4, pp.567-581, 1997. ,
DOI : 10.1097/00004728-199707000-00008
Cortical Change in Alzheimer's Disease Detected with a Disease-specific Population-based Brain Atlas, Cerebral Cortex, vol.11, issue.1, pp.1-16, 2001. ,
DOI : 10.1093/cercor/11.1.1
Computational anatomy: shape, growth, and atrophy comparison via diffeomorphisms, NeuroImage, vol.23, pp.19-33, 2004. ,
DOI : 10.1016/j.neuroimage.2004.07.021
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.121.4222
Geodesic Shooting for Computational Anatomy, Journal of Mathematical Imaging and Vision, vol.13, issue.1???2, pp.209-228, 2006. ,
DOI : 10.1007/s10851-005-3624-0
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2897162
A Log-Euclidean Framework for Statistics on Diffeomorphisms, MICCAI'06, pp.924-931, 2006. ,
DOI : 10.1007/11866565_113
URL : https://hal.archives-ouvertes.fr/inria-00615594
Variational problems on flows of diffeomorphisms for image matching, Quarterly of Applied Mathematics, vol.56, issue.3, pp.587-600, 1998. ,
DOI : 10.1090/qam/1632326
Computing Large Deformation Metric Mappings via Geodesic Flows of Diffeomorphisms, International Journal of Computer Vision, vol.61, issue.2, pp.139-157, 2005. ,
DOI : 10.1023/B:VISI.0000043755.93987.aa
A fast diffeomorphic image registration algorithm, NeuroImage, vol.38, issue.1, pp.95-113, 2007. ,
DOI : 10.1016/j.neuroimage.2007.07.007
Registration of anatomical images using geodesic paths of diffeomorphisms parameterized with stationary vector fields, 2007 IEEE 11th International Conference on Computer Vision, p.7, 2007. ,
DOI : 10.1109/ICCV.2007.4409126
Diffeomorphic image registration with the demons algorithm, MICCAI'07, pp.319-326, 2007. ,
URL : https://hal.archives-ouvertes.fr/inria-00166123
Numerical methods for image registration, 2004. ,
DOI : 10.1093/acprof:oso/9780198528418.001.0001
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.379.3940
Diffeomorphism groups and pattern matching in image analysis, International Journal of Computer Vision, vol.28, issue.3, pp.213-221, 1998. ,
DOI : 10.1023/A:1008001603737
Free subgroups of diffeomorphism groups, Fundam. Math, vol.131, pp.103-121, 1988. ,
Multi-modal image set registration and atlas formation, Medical Image Analysis, vol.10, issue.3, pp.440-451, 2006. ,
DOI : 10.1016/j.media.2005.03.002
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2430608
Symmetric dieomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain, Med. Image. Anal, pp.12-26, 1998. ,
Understanding the Demons algorithm: nonrigid registration by gradient descent, MICCAI'99, pp.597-605, 1999. ,
Gauss-Newton optimization in Diffeomorphic registration, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, p.8, 2008. ,
DOI : 10.1109/ISBI.2008.4541188
Numerical recipes in C: the art of scientific computing, 1992. ,
Iconic feature based nonrigid registration: the PASHA algorithm, Computer Vision and Image Understanding, vol.89, issue.2-3, pp.272-298, 2003. ,
DOI : 10.1016/S1077-3142(03)00002-X
URL : https://hal.archives-ouvertes.fr/inria-00615633
Improving vision-based control using efficient second-order minimization techniques, IEEE International Conference on Robotics and Automation, 2004. Proceedings. ICRA '04. 2004, pp.1843-1848, 2004. ,
DOI : 10.1109/ROBOT.2004.1308092
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.58.7824
High-resolution intersubject averaging and a coordinate system for the cortical surface, Human Brain Mapping, vol.179, issue.4, pp.272-84, 1999. ,
DOI : 10.1002/(SICI)1097-0193(1999)8:4<272::AID-HBM10>3.0.CO;2-4
<title>Landmark matching on brain surfaces via large deformation diffeomorphisms on the sphere</title>, Medical Imaging 1999: Image Processing, pp.710-725, 1999. ,
DOI : 10.1117/12.348628
Brain structural mapping using a novel hybrid implicit/explicit framework based on the level-set method, NeuroImage, vol.24, issue.3, pp.910-937, 2005. ,
DOI : 10.1016/j.neuroimage.2004.09.022
Growth patterns in the developing brain detected by using continuum mechanical tensor maps, Nature, vol.56, issue.6774, pp.190-193, 2000. ,
DOI : 10.1038/35004593
Spatial Normalization of 3D Brain Images Using Deformable Models, Journal of Computer Assisted Tomography, vol.20, issue.4, pp.656-65, 1996. ,
DOI : 10.1097/00004728-199607000-00031
Inferring brain variability from diffeomorphic deformations of currents: An integrative approach, Medical Image Analysis, vol.12, issue.5, 2008. ,
DOI : 10.1016/j.media.2008.06.010
URL : https://hal.archives-ouvertes.fr/hal-00816052
Automated Surface Matching Using Mutual Information Applied to Riemann Surface Structures, Med. Image Comp. Comput.-Assist. Intervention, Proceedings, Part II, pp.666-674, 2005. ,
DOI : 10.1007/11566489_82
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.138.7671
Learning Object Correspondences with the Observed Transport Shape Measure, In: IPMI, pp.25-37, 2003. ,
DOI : 10.1007/978-3-540-45087-0_3
URL : https://hal.archives-ouvertes.fr/inria-00615942
A minimum description length approach to statistical shape modeling, IEEE Transactions on Medical Imaging, vol.21, issue.5, pp.525-562, 2002. ,
DOI : 10.1109/TMI.2002.1009388
Minimum Description Length Shape and Appearance Models, In: IPMI, pp.51-62, 2003. ,
DOI : 10.1007/978-3-540-45087-0_5
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.473.5769
BRAIN SURFACE CONFORMAL PARAMETERIZATION WITH THE RICCI FLOW, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, pp.1312-1315, 2007. ,
DOI : 10.1109/ISBI.2007.357101
Cortical cartography using the discrete conformal approach of circle packings, NeuroImage, vol.23, pp.119-128, 2004. ,
DOI : 10.1016/j.neuroimage.2004.07.018
Conformal Geometry and Brain Flattening, Med. Image Comput. Comput.-Assist. Intervention, pp.271-278, 1999. ,
DOI : 10.1007/10704282_30
Genus zero surface conformal mapping and its application to brain surface mapping, IEEE TMI, vol.23, issue.8, pp.949-958, 2004. ,
Brain Surface Conformal Parameterization Using Riemann Surface Structure, IEEE Transactions on Medical Imaging, vol.26, issue.6, pp.853-865, 2007. ,
DOI : 10.1109/TMI.2007.895464
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3197830
Incorporating statistical measures of anatomical variability in atlasto-subject registration for conformal brain radiotherapy, MICCAI. Volume II, pp.927-934, 2005. ,
Riemannian Elasticity: A Statistical Regularization Framework for Non-linear Registration, MICCAI. Volume II, pp.943-950, 2005. ,
DOI : 10.1007/11566489_116
URL : https://hal.archives-ouvertes.fr/inria-00502675
Log-Euclidean metrics for fast and simple calculus on diffusion tensors, Magnetic Resonance in Medicine, vol.52, issue.2, pp.411-421, 2006. ,
DOI : 10.1002/mrm.20965
URL : https://hal.archives-ouvertes.fr/inria-00502678
Generalized Tensor-Based Morphometry of HIV/AIDS Using Multivariate Statistics on Deformation Tensors, IEEE Transactions on Medical Imaging, vol.27, issue.1, pp.129-141, 2008. ,
DOI : 10.1109/TMI.2007.906091
Abnormal Cortical Complexity and Thickness Profiles Mapped in Williams Syndrome, Journal of Neuroscience, vol.25, issue.16, pp.4146-4158, 2005. ,
DOI : 10.1523/JNEUROSCI.0165-05.2005
Differential Geometry, 1977. ,
The Ricci flow on surfaces Mathematics and general relativity, Contemp. Math. Amer, 1986. ,
The Ricci flow on the 2-sphere, Journal of Differential Geometry, vol.33, issue.2, pp.325-334, 1991. ,
DOI : 10.4310/jdg/1214446319
Geometry and Topology of Three-Manifolds, Princeton lecture notes, 1976. ,
Differential Forms: A Complement to Vector Calculus, 2007. ,
Combinatorial Ricci Flows on Surfaces, Journal of Differential Geometry, vol.63, issue.1, pp.97-129, 2003. ,
DOI : 10.4310/jdg/1080835659
URL : http://arxiv.org/abs/math/0211256
Log-Euclidean metrics for fast and simple calculus on diffusion tensors, Magnetic Resonance in Medicine, vol.52, issue.2, pp.411-421, 2006. ,
DOI : 10.1002/mrm.20965
URL : https://hal.archives-ouvertes.fr/inria-00502678
A fast diffeomorphic image registration algorithm, NeuroImage, vol.38, issue.1, pp.95-113, 2007. ,
DOI : 10.1016/j.neuroimage.2007.07.007
Comparison of standard and Riemannian elasticity for Tensor-Based Morphometry in HIV/AIDS, MICCAI workshop on Statistical Registration: Pairwise and Group-wise Alignment and Atlas Formation, 2007. ,
Automated Ventricular Mapping with Multi-Atlas Fluid Image Alignment Reveals Genetic Effects in Alzheimer's Disease, accepted for publication in, Neuroimage, 2007. ,
3D pattern of brain atrophy in HIV/AIDS visualized using tensor-based morphometry, NeuroImage, vol.34, issue.1, pp.44-60, 2007. ,
DOI : 10.1016/j.neuroimage.2006.08.030
Deformable templates using large deformation kinematics, IEEE Transactions on Image Processing, vol.5, issue.10, pp.1435-1447, 1996. ,
DOI : 10.1109/83.536892
Average Brain Models: A Convergence Study, Computer Vision and Image Understanding, vol.77, issue.2, pp.192-210, 1999. ,
DOI : 10.1006/cviu.1999.0815
URL : https://hal.archives-ouvertes.fr/inria-00615030
Regional Spatial Normalization: Toward an Optimal Target, Journal of Computer Assisted Tomography, vol.25, issue.5, pp.805-816, 2001. ,
DOI : 10.1097/00004728-200109000-00023
An Optimized Individual Target Brain in the Talairach Coordinate System, NeuroImage, vol.17, issue.2, pp.922-927, 2003. ,
DOI : 10.1006/nimg.2002.1084
Mapping structural differences of the corpus callosum in individuals with 18q deletions using targetless regional spatial normalization, Human Brain Mapping, vol.22, issue.4, pp.325-331, 2005. ,
DOI : 10.1002/hbm.20090
A global optimisation method for robust affine registration of brain images, Medical Image Analysis, vol.5, issue.2, pp.143-56, 2001. ,
DOI : 10.1016/S1361-8415(01)00036-6
Statistical Properties of Jacobian Maps and the Realization of Unbiased Large-Deformation Nonlinear Image Registration, IEEE Transactions on Medical Imaging, vol.26, issue.6, pp.822-832, 2007. ,
DOI : 10.1109/TMI.2007.892646
Mean Template for Tensor-Based Morphometry Using Deformation Tensors, MICCAI, pp.826-833, 2007. ,
DOI : 10.1007/978-3-540-75759-7_100
Multivariate Statistics of the Jacobian Matrices in Tensor Based Morphometry and Their Application to HIV/AIDS, AIDS IEEE-Trans. Med. Imag, 2008. ,
DOI : 10.1007/11866565_24
Best individual template selection from deformation tensor minimization, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008. ,
DOI : 10.1109/ISBI.2008.4541032
Nonparametric permutation tests for functional neuroimaging: A primer with examples, Human Brain Mapping, vol.4, issue.1, pp.1-25, 2001. ,
DOI : 10.1002/hbm.1058
Riemannian Elasticity: A Statistical Regularization Framework for Non-linear Registration, pp.943-950, 2005. ,
DOI : 10.1007/11566489_116
URL : https://hal.archives-ouvertes.fr/inria-00502675
BrainSuite: an automated cortical surface identification tool, Med. Imag. Anal, vol.8, pp.129-141, 2002. ,
DOI : 10.1007/978-3-540-40899-4_6
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.105.7378
Deformation tensor morphometry of semantic dementia with quantitative validation, NeuroImage, vol.21, issue.4, pp.1387-1398, 2004. ,
DOI : 10.1016/j.neuroimage.2003.12.009
A template free approach to volumetric spatial normalization of brain anatomy, Pattern Recognition Letters, vol.25, issue.10, pp.1191-1202, 2004. ,
DOI : 10.1016/j.patrec.2004.03.015
unified information-theoretic approach to groupwise non-rigid registration and model building MICCAI, pp.190-193, 2005. ,
Mathematical/Computational Challenges in Creating Population-Based Brain Atlases, Hum. Brain Mapp, issue.9, pp.81-92, 2000. ,
Direct mapping of hippocampal surfaces with intrinsic shape context, NeuroImage, vol.37, issue.3, pp.792-807, 2007. ,
DOI : 10.1016/j.neuroimage.2007.05.016
Cortical Surface Alignment Using Geometry Driven Multispectral Optical Flow, In: IPMI, 2005. ,
DOI : 10.1007/11505730_40
High-resolution intersubject averaging and a coordinate system for the cortical surface, Human Brain Mapping, vol.179, issue.4, pp.272-284, 1999. ,
DOI : 10.1002/(SICI)1097-0193(1999)8:4<272::AID-HBM10>3.0.CO;2-4
A minimum description length approach to statistical shape modeling, IEEE Transactions on Medical Imaging, vol.21, issue.5, pp.525-537, 2002. ,
DOI : 10.1109/TMI.2002.1009388
Multi-scale EM-ICP: A Fast and Robust Approach for Surface Registration, In: Lecture Notes in Computer Science, 2002. ,
DOI : 10.1007/3-540-47979-1_28
URL : https://hal.archives-ouvertes.fr/inria-00615911
Parametrization of Closed Surfaces for 3-D Shape Description, Computer Vision and Image Understanding, vol.61, issue.2, pp.154-170, 1995. ,
DOI : 10.1006/cviu.1995.1013
Shape versus Size: Improved Understanding of the Morphology of Brain Structures, In: MICCAI, 2001. ,
DOI : 10.1007/3-540-45468-3_4
Shape analysis of brain ventricles using SPHARM, Proceedings IEEE Workshop on Mathematical Methods in Biomedical Image Analysis (MMBIA 2001), 2001. ,
DOI : 10.1109/MMBIA.2001.991731
Efficient Registration of 3D SPHARM Surfaces, Fourth Canadian Conference on Computer and Robot Vision (CRV '07), 2007. ,
DOI : 10.1109/CRV.2007.26
Special functions: A group-theoretic approach, 1968. ,
Template gradient matching in spherical images Image Processing: Algorithms and Systems III, Proceedings of the SPIE 5298, pp.88-98, 2004. ,
Genus Zero Surface Conformal Mapping and Its Application to Brain Surface Mapping, IEEE Transactions on Medical Imaging, vol.23, issue.8, p.949, 2004. ,
DOI : 10.1109/TMI.2004.831226
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.129.7761
FFTs for the 2-Sphere-Improvements and Variations, Journal of Fourier Analysis and Applications, vol.9, issue.4, pp.341-385, 2003. ,
DOI : 10.1007/s00041-003-0018-9
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.298.4060
A fast fourier transform compiler, ACM SIGPLAN Conference on Programming Language Design and Implementation, 1999. ,
DOI : 10.1145/989393.989457
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.129.7986
Unbiased dieomorphic atlas construction for computational anatomy, NeuroImage, vol.23, p.151160, 2004. ,
DOI : 10.1016/j.neuroimage.2004.07.068
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.104.3808
Geodesic estimation for large deformation anatomical shape averaging and interpolation, NeuroImage, vol.23, p.139150, 2004. ,
DOI : 10.1016/j.neuroimage.2004.07.010
Constructing dieomorphic representations for the groupwise analysis of non-rigid registrations of medical images, Transactions on Medical Imaging, vol.23, issue.8, p.10061020, 2004. ,
Ecient population registration of data. In: Computer Vision for Biomedical Image Applications, Lecture Notes in Computer Science, vol.3765, p.291301, 2005. ,
Template estimation from unlabeled point set data and surfaces for computational anatomy, Proc. of the International Workshop on the Mathematical Foundations of Computational Anatomy, 2006. ,
Unsupervised learning of an atlas from unlabeled point-sets, IEEE Trans. on Pattern Analysis and Machine Intelligence, vol.26, issue.2, p.160172, 2004. ,
Towards a coherent statistical framework for dense deformable template estimation, Journal of the Royal Statistical Society: Series B (Statistical Methodology), vol.5, issue.1, p.329, 2007. ,
DOI : 10.1111/j.1467-9868.2007.00574.x
Bayesian template estimation in computational anatomy, NeuroImage, vol.42, issue.1, 2008. ,
DOI : 10.1016/j.neuroimage.2008.03.056
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2602958
Sparse Approximation of Currents for Statistics on Curves and Surfaces, Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI), 2008. ,
DOI : 10.1007/978-3-540-85990-1_47
URL : https://hal.archives-ouvertes.fr/hal-00818375
Sparse Approximation of Currents for Statistics on Curves and Surfaces, Research Report, vol.6571, 2008. ,
DOI : 10.1007/978-3-540-85990-1_47
URL : https://hal.archives-ouvertes.fr/hal-00818375
Surface Matching via Currents, Proceedings of Information Processing in Medical Imaging, p.381392, 2005. ,
DOI : 10.1007/11505730_32
URL : https://hal.archives-ouvertes.fr/hal-00263652
Measuring Brain Variability Via Sulcal Lines Registration: A Diffeomorphic Approach, Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI), p.675682, 2007. ,
DOI : 10.1007/978-3-540-75757-3_82
URL : https://hal.archives-ouvertes.fr/inria-00502704
Transport par diéomorphismes de points, de mesures et de courants pour la comparaison de formes et l'anatomie numérique, 2005. ,
Theory of reproducing kernels. Transactions of the, p.337404, 1950. ,
Dieomorphisms groups and pattern matching in image analysis, International Journal of Computer Vision, vol.28, p.213221, 1998. ,
Variational problems on ows of dieomorphisms for image matching, Quaterly of Applied Mathematics, vol.56, issue.3, p.587600, 1998. ,
Bayesian deformable models building via a stochastic approximation algorithm: A convergence study, Bernouilli Journal, 2008. ,
Fundamentals of digital image processing Semiparametric Estimation of Shifts on Lie Groups for Image Registration, 1989. ,
Computable Elastic Distances Between Shapes, SIAM Journal on Applied Mathematics, vol.58, issue.2, pp.565-586, 1998. ,
DOI : 10.1137/S0036139995287685
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.157.6434
Riemannian geometries on spaces of plane curves, Journal of the European Mathematical Society, vol.8, pp.1-48, 2006. ,
DOI : 10.4171/JEMS/37
URL : http://arxiv.org/abs/math/0312384
Analysis of planar shapes using geodesic paths on shape spaces, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.26, issue.3, pp.372-383, 2004. ,
DOI : 10.1109/TPAMI.2004.1262333
On Shape of Plane Elastic Curves, International Journal of Computer Vision, vol.58, issue.7, pp.307-324, 2007. ,
DOI : 10.1007/s11263-006-9968-0
A metric on shape space with explicit geodesics, 2007. ,
Spherical parametrization and remeshing, In: ACM SIG- GRAPH, pp.340-349, 2003. ,
DOI : 10.1145/1201775.882274
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.102.5485
Direct cortical mapping via solving partial differential equations on implicit surfaces, Medical Image Analysis, vol.11, issue.3, pp.207-223, 2007. ,
DOI : 10.1016/j.media.2007.02.001
Direct mapping of hippocampal surfaces with intrinsic shape context, NeuroImage, vol.37, issue.3, pp.792-807, 2007. ,
DOI : 10.1016/j.neuroimage.2007.05.016
Shape Manifolds, Procrustean Metrics, and Complex Projective Spaces, Bulletin of the London Mathematical Society, vol.16, issue.2, pp.81-121, 1984. ,
DOI : 10.1112/blms/16.2.81
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.452.9838
Computational anatomy: an emerging discipline, Quarterly of Applied Mathematics, vol.56, issue.4, pp.617-694, 1998. ,
DOI : 10.1090/qam/1668732
Principal Geodesic Analysis for the Study of Nonlinear Statistics of Shape, IEEE Transactions on Medical Imaging, vol.23, issue.8, pp.995-1005, 2004. ,
DOI : 10.1109/TMI.2004.831793
Morse theory on Hilbert manifolds, Topology, vol.2, issue.4, pp.299-340, 1963. ,
DOI : 10.1016/0040-9383(63)90013-2
URL : http://doi.org/10.1016/0040-9383(63)90013-2
References 1 Active shape models-their training and application, Computer Vision and Image Understanding, vol.61, issue.1, pp.38-59, 1994. ,
Parametrization of Closed Surfaces for 3-D Shape Description, Computer Vision and Image Understanding, vol.61, issue.2, pp.154-170, 1995. ,
DOI : 10.1006/cviu.1995.1013
Medial Models Incorporating Object Variability for 3D Shape Analysis, Information Processing in Medical Imaging, pp.502-516, 2001. ,
DOI : 10.1007/3-540-45729-1_53
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.24.6818
Active appearance models, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.23, issue.6, pp.681-685, 2001. ,
DOI : 10.1109/34.927467
Shape Representation based on Integral Kernels: Application to Image Matching and Segmentation, Proc. CVPR, pp.833-840, 2006. ,
URL : https://hal.archives-ouvertes.fr/inria-00590199
Shape Representation and Classification Using the Poisson Equation, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.28, issue.12, 1991. ,
DOI : 10.1109/TPAMI.2006.253
Investigating implicit shape representations for alignment of livers from serial CT examinations, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008. ,
DOI : 10.1109/ISBI.2008.4541111
Statistical shape influence in geodesic active contours, Proceedings. IEEE Conference on, pp.316-323, 2000. ,
A shape-based approach to the segmentation of medical imagery using level sets, IEEE Transactions on Medical Imaging, vol.22, issue.2, pp.137-154, 2003. ,
DOI : 10.1109/TMI.2002.808355
Implicit Active Shape Models for 3D Segmentation in MR Imaging, pp.209-216, 2004. ,
DOI : 10.1007/978-3-540-30135-6_26
Segmentation of the Liver using a 3D Statistical Shape Model, Zuse Institute Berlin, 2004. ,
Detection and analysis of statistical differences in anatomical shape, Medical Image Analysis, vol.9, issue.1, pp.69-86, 2005. ,
DOI : 10.1016/j.media.2004.07.003
Independent component analysis: algorithms and applications, Neural Networks, vol.13, issue.4-5, pp.4-5, 2000. ,
DOI : 10.1016/S0893-6080(00)00026-5
On the adequacy of principal factor analysis for the study of shape variability, Proc. SPIE, pp.1392-1399, 2005. ,
URL : https://hal.archives-ouvertes.fr/inria-00616012
Shape statistics in kernel space for variational image segmentation, Pattern Recognition, vol.36, issue.9, pp.1929-1943, 2003. ,
DOI : 10.1016/S0031-3203(03)00056-6
Statistical Shape Analysis, IEEE Transactions on, vol.27, issue.4, pp.590-602, 2005. ,
DOI : 10.1007/978-0-387-31439-6_778
Using the logarithm of odds to define a vector space on probabilistic atlases, Medical Image Analysis, vol.11, issue.5, pp.465-477, 2007. ,
DOI : 10.1016/j.media.2007.06.003
Neighbor-Constrained Segmentation With Level Set Based 3-D Deformable Models, IEEE Transactions on Medical Imaging, vol.23, issue.8, pp.940-948, 2004. ,
DOI : 10.1109/TMI.2004.830802
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2838450
A Shape-Guided Deformable Model with Evolutionary Algorithm Initialization for 3D Soft Tissue Segmentation, In: Information Processing in Medical Imaging, vol.4584, pp.1-12, 2007. ,
DOI : 10.1007/978-3-540-73273-0_1
Fully Automatic Anatomical, Pathological, and Functional Segmentation from CT Scans for Hepatic Surgery, Computer Aided Surgery, vol.105, issue.3, pp.131-142, 2001. ,
DOI : 10.1007/BF01420736
URL : https://hal.archives-ouvertes.fr/inria-00615108
Graph Cuts and Efficient N-D Image Segmentation, International Journal of Computer Vision, vol.18, issue.9, pp.109-131, 2006. ,
DOI : 10.1007/s11263-006-7934-5
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.90.657
Shape of caudate nucleus and its cognitive correlates in neuroleptic-naive schizotypal personality disorder, Biological Psychiatry, vol.55, issue.2, pp.177-184, 2004. ,
DOI : 10.1016/j.biopsych.2003.08.005
3D Segmentation in the Clinic: A Grand Challenge, 3D Segmentation in the Clinic: A Grand Challenge, pp.7-15, 2007. ,
The Principal Axes Transformation?A Method for Image Registration, Journal of Nuclear Medicine, vol.31, issue.10, pp.1717-1722, 1990. ,
On the Laplace-Beltrami operator and brain surface flattening, IEEE Transactions on Medical Imaging, vol.18, issue.8, pp.700-711, 1999. ,
DOI : 10.1109/42.796283
Parametrization of Closed Surfaces for 3-D Shape Description, Computer Vision and Image Understanding, vol.61, issue.2, pp.154-170, 1995. ,
DOI : 10.1006/cviu.1995.1013
Weighted Fourier Series Representation and Its Application to Quantifying the Amount of Gray Matter, IEEE Transactions on Medical Imaging, vol.26, issue.4, pp.566-581, 2007. ,
DOI : 10.1109/TMI.2007.892519
Cortical thickness analysis in autism with heat kernel smoothing, NeuroImage, vol.25, issue.4, pp.1256-1265, 2005. ,
DOI : 10.1016/j.neuroimage.2004.12.052
Methods of Mathematical Physics: Volume II. Interscience, 1953. ,
Measuring the thickness of the human cerebral cortex from magnetic resonance images, Proceedings of the National Academy of Sciences, vol.97, issue.20, pp.11050-11055, 2000. ,
DOI : 10.1073/pnas.200033797
On determining the spectrum of primordial inhomogeneity from the COBE DMR sky maps: Method, The Astrophysical Journal, vol.430, issue.430, p.85, 1994. ,
DOI : 10.1086/187444
Genus zero surface conformal mapping and its application to brain surface mapping, IEEE Transactions on Medical Imaging, vol.23, pp.1-10, 2004. ,
Cortical cartography using the discrete conformal approach of circle packings, NeuroImage, vol.23, pp.119-128, 2004. ,
DOI : 10.1016/j.neuroimage.2004.07.018
Three-dimensional mapping of cortical thickness using Laplace's Equation, Human Brain Mapping, vol.10, issue.1, pp.12-32, 2000. ,
DOI : 10.1002/1097-0193(200009)11:1<12::AID-HBM20>3.0.CO;2-K
Introductory real analysis, 1970. ,
Cortical thickness analysis examined through power analysis and a population simulation, NeuroImage, vol.24, issue.1, pp.163-173, 2005. ,
DOI : 10.1016/j.neuroimage.2004.07.045
Automated 3-D Extraction of Inner and Outer Surfaces of Cerebral Cortex from MRI, NeuroImage, vol.12, issue.3, pp.340-356, 2000. ,
DOI : 10.1006/nimg.1999.0534
Amygdala Volume and Nonverbal Social Impairment in Adolescent and Adult Males With Autism, Archives of General Psychiatry, vol.63, issue.12, pp.1417-1428, 2006. ,
DOI : 10.1001/archpsyc.63.12.1417
Smooth functional and structural maps on the neocortex via orthonormal bases of the laplace-beltrami operator, IEEE Transactions on Medical Imaging, vol.25, pp.1296-1396, 2006. ,
Makedon, and A. Saykin. surface-based approach for classification of 3d neuroanatomical structures, Intelligent Data Analysis, vol.8, pp.519-542, 2004. ,
Framework for the statistical shape analysis of brain structures using spharm-pdm, In Insight Journal, 2006. ,
<title>Optimization method for creating semi-isometric flat maps of the cerebral cortex</title>, Medical Imaging 2000: Image Processing, 2000. ,
DOI : 10.1117/12.387731
An eulerian pde approach for computing tissue thickness, IEEE Transactions on Medical Imaging, vol.22, issue.10, pp.1332-1339, 2003. ,
DOI : 10.1109/TMI.2003.817775
Rician Noise Removal in Diffusion Tensor MRI, MICCAI 2006, pp.117-125, 2006. ,
DOI : 10.1007/11866565_15
Validation of diffusion tensor MRI-based muscle fiber tracking, Magnetic Resonance in Medicine, vol.35, issue.1, pp.97-104, 2002. ,
DOI : 10.1002/mrm.10198
Principal Geodesic Analysis on Symmetric Spaces: Statistics of Diffusion Tensors, 2004. ,
DOI : 10.1007/978-3-540-27816-0_8
Riemannian geometry for the statistical analysis of diffusion tensor data, Signal Processing, vol.87, issue.2, pp.250-262, 2007. ,
DOI : 10.1016/j.sigpro.2005.12.018
Analytical Computation of the Eigenvalues and Eigenvectors in DT-MRI, Journal of Magnetic Resonance, vol.152, issue.1, pp.41-47, 2001. ,
DOI : 10.1006/jmre.2001.2400
Groups and Geometric Analysis, 1984. ,
DOI : 10.1090/surv/083
Deconvolution Density Estimation on the Space of Positive Definite Symmetric Matrices, Nonparametric Statistics and Mixture Models, 2007. ,
DOI : 10.1142/9789814340564_0010
Integral curves of noisy vector fields and statistical problems in diffusion tensor imaging: Nonparametric kernel estimation and hypotheses testing, The Annals of Statistics, vol.35, issue.4, pp.1576-1607, 2007. ,
DOI : 10.1214/009053607000000073
Diffusion and Perfusion Magnetic Resonance Imaging, Journal of Computer Assisted Tomography, vol.19, issue.5, 1995. ,
DOI : 10.1097/00004728-199509000-00032
URL : https://hal.archives-ouvertes.fr/hal-00350000
Magnetic resonance imaging of multiple sclerosis: new insights linking pathology to clinical evolution, Current Opinion in Neurology, vol.14, issue.3, pp.279-287, 2001. ,
DOI : 10.1097/00019052-200106000-00004
Aspects of Multivariate Statistics, 1978. ,
New magnetic resonance imaging methods for cerebrovascular disease: Emerging clinical applications, Annals of Neurology, vol.9, issue.5, pp.559-570, 2000. ,
DOI : 10.1002/1531-8249(200005)47:5<559::AID-ANA2>3.0.CO;2-S
White matter abnormalities in HIV-1 infection: A diffusion tensor imaging study, Psychiatry Research: Neuroimaging, vol.106, issue.1, pp.15-24, 2001. ,
DOI : 10.1016/S0925-4927(00)00082-2
Using magnetic resonance imaging and diffusion tensor imaging to assess brain damage in alcoholics, Alcohol Research & Health, vol.27, issue.2, pp.146-152, 2003. ,
Random Ellipsoids and False Discovery Rates: Statistics for Diffusion Tensor Imaging Data, 2006. ,
Cross-subject comparison of principal diffusion direction maps, Magnetic Resonance in Medicine, vol.28, issue.6, pp.1423-1431, 2005. ,
DOI : 10.1002/mrm.20503
Harmonic Analysis on Symmetric Spaces and Applications, II, 1988. ,
DOI : 10.1007/978-1-4612-3820-1
Statistical Analysis of Diffusion Tensors in Diffusion-Weighted Magnetic Resonance Imaging Data, Journal of the American Statistical Association, vol.102, issue.480, pp.1085-1102, 2007. ,
DOI : 10.1198/016214507000000581
Cingulate fasciculus integrity disruption in schizophrenia: a magnetic resonance diffusion tensor imaging study, Biological Psychiatry, vol.54, issue.11, pp.1171-1180, 2003. ,
DOI : 10.1016/S0006-3223(03)00419-0
Anterior Cingulum Abnormalities in Male Patients With Schizophrenia Determined Through Diffusion Tensor Imaging, American Journal of Psychiatry, vol.161, issue.3, 2004. ,
DOI : 10.1176/appi.ajp.161.3.573
Three-dimensional tracking of axonal projections in the brain by magnetic resonance imaging, Annals of Neurology, vol.40, issue.2, pp.265-269, 1999. ,
DOI : 10.1002/1531-8249(199902)45:2<265::AID-ANA21>3.0.CO;2-3
Tracking neuronal fiber pathways in the living human brain, Proc. Natl. Acad. Sci USA, pp.96-10422, 1999. ,
DOI : 10.1073/pnas.96.18.10422
Fiber Tracking in q-Ball Fields Using Regularized Particle Trajectories, pp.52-63 ,
DOI : 10.1007/11505730_5
URL : https://hal.archives-ouvertes.fr/hal-00349651
Estimating distributed anatomical connectivity using fast marching methods and diffusion tensor imaging, IEEE Transactions on Medical Imaging, vol.21, issue.5, pp.505-512, 2002. ,
DOI : 10.1109/TMI.2002.1009386
A Bayesian approach for stochastic white matter tractography, IEEE Transactions on Medical Imaging, vol.25, issue.8, pp.965-978, 2006. ,
DOI : 10.1109/TMI.2006.877093
A Riemannian Approach to Diffusion Tensor Images Segmentation, pp.591-602 ,
DOI : 10.1007/11505730_49
Probabilistic Fiber Tracking Using Particle Filtering, Lecture Notes in Computer Science, vol.4792, issue.2, pp.144-152, 2007. ,
DOI : 10.1007/978-3-540-75759-7_18
Detection of multiple pathways in the spinal cord white matter using q-ball imaging, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2008. ,
DOI : 10.1109/ISBI.2008.4541091
URL : https://hal.archives-ouvertes.fr/inria-00423368
Finding the brain cortex using fuzzy segmentation, isosurfaces, and deformable surface models, Lecture Notes in Computer Science, vol.1230, pp.399-404, 1997. ,
DOI : 10.1007/3-540-63046-5_33
A geometric snake model for segmentation of medical imagery, IEEE Transactions on Medical Imaging, vol.16, issue.2, pp.199-209, 1997. ,
DOI : 10.1109/42.563665
URL : https://hal.archives-ouvertes.fr/hal-00002725
DTI segmentation by statistical surface evolution, IEEE Transactions on Medical Imaging, vol.25, issue.6, pp.685-700, 2006. ,
DOI : 10.1109/TMI.2006.873299
URL : https://hal.archives-ouvertes.fr/inria-00070183
DTI segmentation using an information theoretic tensor dissimilarity measure, IEEE Transactions on Medical Imaging, vol.24, issue.10, pp.1267-1277, 2005. ,
DOI : 10.1109/TMI.2005.854516
Fuzzy Nonparametric DTI Segmentation for Robust Cingulum-Tract Extraction ,
DOI : 10.1007/978-3-540-75757-3_36
Finsler Tractography for White Matter Connectivity Analysis of the Cingulum Bundle, pp.36-43, 2007. ,
DOI : 10.1007/978-3-540-75757-3_5
Locally-Constrained Region-Based Methods for DW-MRI Segmentation, 2007 IEEE 11th International Conference on Computer Vision, 2007. ,
DOI : 10.1109/ICCV.2007.4409167
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3646532
Vessels as 4-D Curves: Global Minimal 4-D Paths to Extract 3-D Tubular Surfaces and Centerlines, IEEE Transactions on Medical Imaging, vol.26, issue.9, pp.1213-1223, 2007. ,
DOI : 10.1109/TMI.2007.903696
Global minimum for active contour models: a minimal path approach, Proceedings CVPR IEEE Computer Society Conference on Computer Vision and Pattern Recognition, pp.666-673, 1996. ,
DOI : 10.1109/CVPR.1996.517144
Fiber Pathways of the Brain, 2006. ,
DOI : 10.1093/acprof:oso/9780195104233.001.0001
Finsler Active Contours, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.30, issue.3 ,
DOI : 10.1109/TPAMI.2007.70713
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2796633
New possibilities with Sobolev active contours, In: SSVM, pp.153-164, 2007. ,
DOI : 10.1007/978-3-540-72823-8_14
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.102.233
Building a complete surface model from sparse data using statistical shape models: Application to computer assisted knee surgery, Medical Image Computing and Computer-Assisted Intervention-MICCAI 98, pp.880-887 ,
DOI : 10.1007/BF00055001
Statistical deformable bone models for robust 3D surface extrapolation from sparse data, Medical Image Analysis, vol.11, issue.2, 2006. ,
DOI : 10.1016/j.media.2006.05.001
A scheme for automatically building three-dimensional morphometric anatomical atlases: application to a skull atlas, Medical Image Analysis, vol.2, issue.1, pp.37-60, 1998. ,
DOI : 10.1016/S1361-8415(01)80027-X
Automatic shape model building based on principal geodesic analysis bootstrapping, Medical Image Analysis, vol.12, issue.2, 2007. ,
DOI : 10.1016/j.media.2007.08.004
Canonical Correlation Analysis of Sub-cortical Brain Structures Using Non-rigid Registration, Lecture Notes in Computer Science, vol.4057, p.66, 2006. ,
DOI : 10.1007/11784012_9
An adaptive-focus statistical shape model for segmentation and shape modeling of 3-D brain structures, IEEE Transactions on Medical Imaging, vol.20, issue.4, pp.257-270, 2001. ,
DOI : 10.1109/42.921475
Reconstructing the complete 3d shape of faces from partial information, Informationstechnik und Technische Informatik, vol.44, issue.6, pp.1-8, 2002. ,
3D Reconstruction of Human Faces from Occluding Contours, Lecture Notes in Computer Science, vol.4418, p.261, 2007. ,
DOI : 10.1007/978-3-540-71457-6_24
Curvature Guided Level Set Registration Using Adaptive Finite Elements, In: Pattern Recognition, pp.527-536, 2007. ,
DOI : 10.1007/978-3-540-74936-3_53
Optimal Step Nonrigid ICP Algorithms for Surface Registration. Computer Vision and Pattern Recognition, CVPR'07. IEEE Conference on, pp.1-8, 2007. ,
Pattern recognition and machine learning References 1 Axial homeosis and appendicular skeleton defects in mice with targeted disruption of hoxd-11, Development, vol.120, pp.2187-2198, 1995. ,
Shape Modeling and Analysis with Entropy-Based Particle Systems, LNCS 4584, pp.333-345, 2007. ,
DOI : 10.1007/978-3-540-73273-0_28
Statistical Shape Analysis of Multi-Object Complexes, 2007 IEEE Conference on Computer Vision and Pattern Recognition, pp.1-8, 2007. ,
DOI : 10.1109/CVPR.2007.383336
Boundary and medial shape analysis of the hippocampus in schizophrenia, Medical Image Analysis, 2004. ,
Estimating the Statistics of Multi-object Anatomic Geometry Using Inter-object Relationships, Deep Structure, Singularities, and Computer Vision, pp.60-71, 2005. ,
DOI : 10.1007/11577812_6
Morphometrics and the role of the phenotype in studies of the evolution of developmental mechanisms, Gene, vol.287, issue.1-2, pp.3-10, 2002. ,
DOI : 10.1016/S0378-1119(01)00867-8
Neuroanatomical differences between mouse strains as shown by high-resolution 3D MRI, Neuroanatomical differences between mouse strains as shown by highresolution 3d mri, pp.99-105, 2005. ,
DOI : 10.1016/j.neuroimage.2005.07.008
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.90.6753
Shape Discrimination in the Hippocampus Using an MDL Model, pp.38-50, 2003. ,
DOI : 10.1007/978-3-540-45087-0_4
The high-dimension, low-sample-size geometric representation holds under mild conditions, Biometrika, vol.94, issue.3, pp.760-766, 2007. ,
DOI : 10.1093/biomet/asm050
URL : http://biomet.oxfordjournals.org/cgi/content/short/94/3/760
Hypothesis Testing with Nonlinear Shape Models, IPMI'05, pp.15-26, 2005. ,
DOI : 10.1007/11505730_2
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.103.8580
Framework for the statistical shape analysis of brain structures using SPHARM-PDM, The Insight Journal, 2006. ,
STATISTICAL SHAPE ANALYSIS OF BRAIN STRUCTURES USING SPHERICAL WAVELETS, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2007. ,
DOI : 10.1109/ISBI.2007.356825
Detection and analysis of statistical differences in anatomical shape, Medical Image Analysis, vol.9, issue.1, pp.69-86, 2005. ,
DOI : 10.1016/j.media.2004.07.003
A shape analysis framework for small animal phenotyping with application to mice with a targeted disruption of Hoxd11, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, pp.512-516, 2008. ,
DOI : 10.1109/ISBI.2008.4541045
Magnetic Resonance Imaging and Head Circumference Study of Brain Size in Autism, Archives of General Psychiatry, vol.62, issue.12, pp.1366-1376, 2005. ,
DOI : 10.1001/archpsyc.62.12.1366
Evaluating the use of exploratory factor analysis in psychological research., Psychological Methods, vol.4, issue.3, pp.272-299, 1999. ,
DOI : 10.1037/1082-989X.4.3.272
An Improvement on Horn's Parallel Analysis Methodology for Selecting the Correct Number of Factors to Retain, Educational and Psychological Measurement, vol.99, issue.3, pp.377-393, 1995. ,
DOI : 10.1177/0013164495055003002
Principal warps: thin-plate splines and the decomposition of deformations, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.11, issue.6, 1989. ,
DOI : 10.1109/34.24792
Particle-Based Shape Analysis of Multi-object Complexes, Proceedings of the 11th International Conference on Medical Image Computing and Computer Assisted Intervention, pp.MIC- CAI, 2008. ,
DOI : 10.1007/978-3-540-85988-8_57
Applied Multivariate Analysis, 2002. ,
DOI : 10.1007/b98963
Multiple landmark warping using thin-plate splines, In: IPCV, pp.256-263, 2006. ,
Duplication of the Hoxd11 Gene Causes Alterations in the Axial and Appendicular Skeleton of the Mouse, Developmental Biology, vol.249, issue.1, pp.96-107, 2002. ,
DOI : 10.1006/dbio.2002.0755