Multiscale Modeling of the Early CD8 T-Cell Immune Response in Lymph Nodes: An Integrative Study

Sotiris Prokopiou 1, * Loic Barbarroux 1, 2 Samuel Bernard 3 Julien Mafille 4 Yann Leverrier 4 Christophe Arpin 4 Jacqueline Marvel 5, 4 Olivier Gandrillon 6, 1 Fabien Crauste 1, 2
* Auteur correspondant
1 DRACULA - Multi-scale modelling of cell dynamics : application to hematopoiesis
ICJ - Institut Camille Jordan [Villeurbanne], Inria Grenoble - Rhône-Alpes, CGPhiMC - Centre de génétique et de physiologie moléculaire et cellulaire
2 ICJ - Institut Camille Jordan [Villeurbanne]
3 UCBL - Université Claude Bernard Lyon 1
4 CIRI - Centre International de Recherche en Infectiologie
5 SFR Biosciences
6 CGPhiMC - Centre de génétique et de physiologie moléculaire et cellulaire
Abstract : CD8 T-cells are critical in controlling infection by intracellular pathogens. Upon encountering antigen presenting cells, T-cell receptor activation promotes the differentiation of naïve CD8 T-cells into strongly proliferating activated and effector stages. We propose a 2D-multiscale computational model to study the maturation of CD8 T-cells in a lymph node controlled by their molecular profile. A novel molecular pathway is presented and converted into an ordinary differential equation model, coupled with a cellular Potts model to describe cell-cell interactions. Key molecular players such as activated IL2 receptor and Tbet levels control the differentiation from naïve into activated and effector stages, respectively, while caspases and Fas-Fas ligand interactions control cell apoptosis. Coupling this molecular model to the cellular scale successfully reproduces qualitatively the evolution of total CD8 T-cell counts observed in mice lymph node, between Day 3 and 5.5 post-infection. Furthermore, this model allows us to make testable predictions of the evolution of the different CD8 T-cell stages.
Keywords : APC CD8 T-cells cellular Potts model multiscale immune modeling
Type de document :
Article dans une revue
Computation, MDPI, 2014, 2 (4), pp.159-181. 〈10.3390/computation2040159〉
Liste complète des métadonnées
https://hal.inria.fr/hal-01074736
Contributeur : Fabien Crauste <>
Soumis le : mercredi 15 octobre 2014 - 12:14:24
Dernière modification le : mardi 24 juillet 2018 - 13:21:01

Lien texte intégral

openaccess

Identifiants

Collections

ICJ | CGPHIMC | UNIV-ST-ETIENNE | ENS-LYON | INRIA | EC-LYON | CCIN2P3 | TDS-MACS | INSA-LYON | UNIV-LYON1

Citation

Sotiris Prokopiou, Loic Barbarroux, Samuel Bernard, Julien Mafille, Yann Leverrier, et al.. Multiscale Modeling of the Early CD8 T-Cell Immune Response in Lymph Nodes: An Integrative Study. Computation, MDPI, 2014, 2 (4), pp.159-181. 〈10.3390/computation2040159〉. 〈hal-01074736〉

Exporter

BibTeX TEI DC DCterms EndNote

Partager

Métriques

Consultations de la notice

571

Contact


archive-ouverte@inria.fr