A. Sotiras, C. Davatzikos, and N. Paragios, Deformable Medical Image Registration: A Survey, IEEE Transactions on Medical Imaging, vol.32, issue.7, 2012.
DOI : 10.1109/TMI.2013.2265603

URL : https://hal.archives-ouvertes.fr/hal-00684715

S. Ourselin, . Roche, . Subsol, N. Pennec, and . Ayache, Reconstructing a 3D structure from serial histological sections, Image and Vision Computing, vol.19, issue.1-2, pp.25-31, 2001.
DOI : 10.1016/S0262-8856(00)00052-4

URL : https://hal.archives-ouvertes.fr/cea-00333669

M. Jenkinson, P. Bannister, M. Brady, and S. Smith, Improved Optimization for the Robust and Accurate Linear Registration and Motion Correction of Brain Images, NeuroImage, vol.17, issue.2, pp.825-841, 2002.
DOI : 10.1006/nimg.2002.1132

R. Shekhar and V. Zagrodsky, Mutual information-based rigid and nonrigid registration of ultrasound volumes, IEEE Transactions on Medical Imaging, vol.21, issue.1, pp.9-22, 2002.
DOI : 10.1109/42.981230

E. Kokiopoulou and P. Frossard, Minimum distance between pattern transformation manifolds: Algorithm and applications Pattern Analysis and Machine Intelligence, IEEE Transactions on, vol.31, issue.7, pp.1225-1238, 2009.

D. Zikic, B. Glocker, O. Kutter, M. Groher, N. Komodakis et al., Linear intensity-based image registration by Markov random fields and discrete optimization, Medical Image Analysis, vol.14, issue.4, pp.550-562, 2010.
DOI : 10.1016/j.media.2010.04.003

URL : https://hal.archives-ouvertes.fr/hal-00856077

P. Viola and W. M. Wells, Alignment by maximization of mutual information, Proceedings of IEEE International Conference on Computer Vision, pp.137-154, 1997.
DOI : 10.1109/ICCV.1995.466930

N. Komodakis, N. Paragios, and G. Tziritas, MRF Energy Minimization and Beyond via Dual Decomposition, PAMI, pp.531-52, 2011.
DOI : 10.1109/TPAMI.2010.108

URL : https://hal.archives-ouvertes.fr/hal-00856311

S. Ourselin, A. Roche, S. Prima, and N. Ayache, Block Matching: A??General??Framework??to??Improve Robustness of??Rigid??Registration of Medical Images, Third International Conference on Medical Robotics of Lectures Notes in Computer Science, pp.11-14, 1935.
DOI : 10.1007/978-3-540-40899-4_57

URL : https://hal.archives-ouvertes.fr/inria-00615860

M. Modat, M. David, P. Cash, . Daga, P. Gawin et al., A symmetric block-matching framework for global registration, SPIE Medical Imaging. International Society for Optics and Photonics, pp.90341-90341, 2014.

S. Klein, M. Staring, K. Murphy, M. A. Viergever, and J. Pluim, <emphasis emphasistype="mono">elastix</emphasis>: A Toolbox for Intensity-Based Medical Image Registration, IEEE Transactions on Medical Imaging, vol.29, issue.1, pp.196-205, 2010.
DOI : 10.1109/TMI.2009.2035616