M. Ahissar and S. Hochstein, Attentional control of early perceptual learning., Proceedings of the National Academy of Sciences of the United States of America, pp.90-5718, 1993.
DOI : 10.1073/pnas.90.12.5718

G. Alexander, M. Delong, and P. Strick, Parallel Organization of Functionally Segregated Circuits Linking Basal Ganglia and Cortex, Annual Review of Neuroscience, vol.9, issue.1, pp.357-381, 1986.
DOI : 10.1146/annurev.ne.09.030186.002041

D. Badre, Cognitive control, hierarchy, and the rostro???caudal organization of the frontal lobes, Trends in Cognitive Sciences, vol.12, issue.5, pp.193-200, 2008.
DOI : 10.1016/j.tics.2008.02.004

P. P. Balasubramani, V. S. Chakravarthy, B. Ravindran, and A. A. Moustafa, An extended reinforcement learning model of basal ganglia to understand the contributions of serotonin and dopamine in risk-based decision making, reward prediction, and punishment learning, Frontiers in Computational Neuroscience, vol.276, 2014.
DOI : 10.1098/rspb.2009.1312

B. W. Balleine and S. Killcross, Parallel incentive processing: an integrated view of amygdala function, Trends in Neurosciences, vol.29, issue.5, pp.272-279, 2006.
DOI : 10.1016/j.tins.2006.03.002

R. Bandler and M. T. Shipley, Columnar organization in the midbrain periaqueductal gray: modules for emotional expression?, Trends in Neurosciences, vol.17, issue.9, pp.379-389, 1994.
DOI : 10.1016/0166-2236(94)90047-7

M. A. Belova, J. J. Paton, S. E. Morrison, and C. D. Salzman, Expectation Modulates Neural Responses to Pleasant and Aversive Stimuli in Primate Amygdala, Neuron, vol.55, issue.6, pp.55-970, 2007.
DOI : 10.1016/j.neuron.2007.08.004

A. M. Bornstein and N. D. Daw, Multiplicity of control in the basal ganglia: computational roles of striatal subregions, Current Opinion in Neurobiology, vol.21, issue.3, pp.374-380, 2011.
DOI : 10.1016/j.conb.2011.02.009

Y. Burnod, An adaptive neural network : the cerebral cortex, 1989.

R. N. Cardinal, J. A. Parkinson, J. Hall, and B. J. Everitt, Emotion and motivation: the role of the amygdala, ventral striatum, and prefrontal cortex, Neuroscience & Biobehavioral Reviews, vol.26, issue.3, pp.321-352, 2002.
DOI : 10.1016/S0149-7634(02)00007-6

M. Carrere and F. Alexandre, A pavlovian model of the amygdala and its influence within the medial temporal lobe, Frontiers in Systems Neuroscience, vol.46, issue.129, p.9, 2015.
DOI : 10.1016/j.neuron.2005.04.026
URL : https://hal.archives-ouvertes.fr/hal-01145790

M. D. Cassell, L. J. Freedman, and C. Shi, The Intrinsic Organization of the Central Extended Amygdala, Annals of the New York Academy of Sciences, vol.23, issue.1 ADVANCING FRO, pp.217-241, 1999.
DOI : 10.1056/NEJM199403103301006

A. Craig, How do you feel ??? now? The anterior insula and human awareness, Nature Reviews Neuroscience, vol.90, issue.1, pp.59-70, 2009.
DOI : 10.1016/j.neuroimage.2007.05.026

A. D. Craig, Interoception: the sense of the physiological condition of the body, Current Opinion in Neurobiology, vol.13, issue.4, pp.500-505, 2003.
DOI : 10.1016/S0959-4388(03)00090-4

A. R. Damasio and G. B. Carvalho, The nature of feelings: evolutionary and neurobiological origins, Nature Reviews Neuroscience, vol.17, issue.2, pp.143-152, 2013.
DOI : 10.1038/nrn3403

P. Dayan and Y. Niv, Reinforcement learning: The Good, The Bad and The Ugly, Current Opinion in Neurobiology, vol.18, issue.2, pp.185-196, 2008.
DOI : 10.1016/j.conb.2008.08.003

P. Dean, P. Redgrave, and G. W. Westby, Event or emergency? Two response systems in the mammalian superior colliculus, Trends in Neurosciences, vol.12, issue.4, pp.137-147, 1989.
DOI : 10.1016/0166-2236(89)90052-0

A. Dickinson and B. W. Balleine, The Role of Learning in the Operation of Motivational Systems, Stevens' handbook of experimental psychology (3rd éd., Vols. 3 : Learning, Motivation and Emotion, pp.497-533, 2002.
DOI : 10.1002/0471214426.pas0312

M. S. Fanselow and H. Dong, Are the Dorsal and Ventral Hippocampus Functionally Distinct Structures?, Neuron, vol.65, issue.1, pp.7-19, 2015.
DOI : 10.1016/j.neuron.2009.11.031

J. Fix, N. P. Rougier, and F. Alexandre, A Dynamic Neural Field Approach to the Covert and Overt Deployment of Spatial Attention, Cognitive Computation, vol.25, issue.1A, pp.279-293, 2011.
DOI : 10.1007/s12559-010-9083-y
URL : https://hal.archives-ouvertes.fr/inria-00536374

K. Friston, A Free Energy Principle for Biological Systems, Entropy, issue.11, pp.14-2100, 2012.

J. Fuster, The prefontal cortex. anatomy, physiology and neurophysiology of the frontal lobe, 1989.

R. Genud-gabai, O. Klavir, and R. Paz, Safety Signals in the Primate Amygdala, Journal of Neuroscience, vol.33, issue.46, pp.17986-17994, 2013.
DOI : 10.1523/JNEUROSCI.1539-13.2013

M. Graziano, THE ORGANIZATION OF BEHAVIORAL REPERTOIRE IN MOTOR CORTEX, Annual Review of Neuroscience, vol.29, issue.1, pp.105-134, 2006.
DOI : 10.1146/annurev.neuro.29.051605.112924

C. Gros, Cognition and Emotion: Perspectives of a Closing Gap, Cognitive Computation, vol.32, issue.2, pp.78-85, 2010.
DOI : 10.1007/s12559-010-9034-7

A. J. Gruber and R. J. Mcdonald, Context, emotion, and the strategic pursuit of goals: interactions among multiple brain systems controlling motivated behavior, Frontiers in Behavioral Neuroscience, vol.6, issue.50, 2012.
DOI : 10.3389/fnbeh.2012.00050

R. W. Guillery, Anatomical pathways that link perception and action, Progress in brain research, pp.235-256, 2005.
DOI : 10.1016/S0079-6123(05)49017-2

S. Haber, J. Fudge, and N. Mcfarland, Striatonigrostriatal pathways in primates form an ascending spiral from the shell to the dorsolateral striatum, The Journal of Neuroscience, vol.20, issue.6, pp.2369-2382, 2000.

S. Hélie, S. W. Ell, and F. G. Ashby, Learning robust cortico-cortical associations with the basal ganglia: An integrative review, Cortex, vol.64, pp.123-135, 2015.
DOI : 10.1016/j.cortex.2014.10.011

O. Jensen and J. E. Lisman, Hippocampal sequence-encoding driven by a cortical multi-item working memory buffer, Trends in Neurosciences, vol.28, issue.2, pp.67-72, 2005.
DOI : 10.1016/j.tins.2004.12.001

D. Joel, Y. Niv, and E. Ruppin, Actor???critic models of the basal ganglia: new anatomical and computational perspectives, Neural Networks, vol.15, issue.4-6, pp.4-6, 2002.
DOI : 10.1016/S0893-6080(02)00047-3

R. Kassab and F. Alexandre, Integration of exteroceptive and interoceptive information within the hippocampus: a computational study, Frontiers in Systems Neuroscience, vol.126, issue.74, p.9, 2015.
DOI : 10.1016/S0166-4328(01)00256-X
URL : https://hal.archives-ouvertes.fr/hal-01237876

E. Koechlin, C. Ody, and F. Kouneiher, The Architecture of Cognitive Control in the Human Prefrontal Cortex, Science, vol.302, issue.5648, pp.302-1181, 2003.
DOI : 10.1126/science.1088545

F. Kouneiher, S. Charron, and E. Koechlin, Motivation and cognitive control in the human prefrontal cortex, Nature Neuroscience, vol.19, issue.7, pp.939-945, 2009.
DOI : 10.1016/j.neuroimage.2004.07.041

M. L. Kringelbach, The human orbitofrontal cortex: linking reward to hedonic experience, Nature Reviews Neuroscience, vol.8, issue.9, pp.691-702, 2005.
DOI : 10.1073/pnas.0402680101

H. Laborit, Eloge de la fuite The amygdala, Folio Essais. LeDoux, J. Current Biology, vol.17, issue.20, pp.868-874, 1976.

C. Lee, W. H. Rohrer, and D. L. Sparks, Population coding of saccadic eye movements by neurons in the superior colliculus, Nature, vol.332, issue.6162, pp.357-360, 1038.
DOI : 10.1038/332357a0

F. Mannella, K. Gurney, and G. Baldassarre, The nucleus accumbens as a nexus between values and goals in goal-directed behavior: a review and a new hypothesis, Frontiers in Behavioral Neuroscience, vol.7, 2013.
DOI : 10.3389/fnbeh.2013.00135

M. Manto, J. M. Bower, A. B. Conforto, J. M. Delgado-garcía, S. N. Da-guarda et al., Consensus Paper: Roles of the Cerebellum in Motor Control???The Diversity of Ideas on Cerebellar Involvement in Movement, The Cerebellum, vol.9, issue.4, pp.11-457, 2012.
DOI : 10.1007/s12311-011-0331-9

J. L. Mcclelland, B. L. Mcnaughton, and R. C. Reilly, Why there are complementary learning systems in the hippocampus and neocortex: Insights from the successes and failures of connectionist models of learning and memory., Psychological Review, vol.102, issue.3, pp.419-457, 1995.
DOI : 10.1037/0033-295X.102.3.419

J. G. Mchaffie, T. R. Stanford, B. E. Stein, V. Coizet, and P. Redgrave, Subcortical loops through the basal ganglia, Trends in Neurosciences, vol.28, issue.8, pp.401-407, 2005.
DOI : 10.1016/j.tins.2005.06.006
URL : https://hal.archives-ouvertes.fr/inserm-00411012

F. A. Middleton and P. L. Strick, Basal ganglia and cerebellar loops: motor and cognitive circuits, Brain Research Reviews, vol.31, issue.2-3, pp.31-236, 2000.
DOI : 10.1016/S0165-0173(99)00040-5

A. Milner and M. Goodale, The visual brain in action, 1995.
DOI : 10.1093/acprof:oso/9780198524724.001.0001

A. A. Moustafa, M. W. Gilbertson, S. P. Orr, M. M. Herzallah, R. J. Servatius et al., A model of amygdala???hippocampal???prefrontal interaction in fear conditioning and extinction in animals, Brain and Cognition, vol.81, issue.1, pp.29-43, 2013.
DOI : 10.1016/j.bandc.2012.10.005

Y. Niv, Cost, Benefit, Tonic, Phasic: What Do Response Rates Tell Us about Dopamine and Motivation?, Annals of the New York Academy of Sciences, vol.23, issue.1, pp.357-376, 2007.
DOI : 10.1016/j.tics.2004.07.009

J. Norman, Two visual systems and two theories of perception: An attempt to reconcile the constructivist and ecological approaches, Behavioral and Brain Sciences, vol.25, issue.01, pp.73-144, 2002.
DOI : 10.1017/S0140525X0200002X

L. G. Nowak and J. Bullier, The Timing of Information Transfer in the Visual System, Extrastriate cortex in primates, pp.205-241, 1997.
DOI : 10.1007/978-1-4757-9625-4_5

O. 'regan, J. K. Noë, and A. , A sensorimotor account of vision and visual consciousness. The Behavioral and brain sciences, 2001.

O. Reilly and R. C. , The What and How of prefrontal cortical organization, Trends in Neurosciences, vol.33, issue.8, pp.355-361, 2010.

O. Reilly, R. C. Herd, S. A. Pauli, and W. M. , Computational models of cognitive control, Current Opinion in Neurobiology, vol.20, issue.2, 2010.

O. Reilly, R. C. Rudy, and J. W. , Conjunctive representations in learning and memory: Principles of cortical and hippocampal function., Psychological Review, vol.108, issue.2, pp.311-345, 2001.
DOI : 10.1037/0033-295X.108.2.311

P. Oudeyer, F. Kaplan, and V. Hafner, Intrinsic Motivation Systems for Autonomous Mental Development, IEEE Transactions on Evolutionary Computation, vol.11, issue.2, pp.265-286890271, 2006.
DOI : 10.1109/TEVC.2006.890271

A. Parent and L. N. Hazrati, Functional anatomy of the basal ganglia. I. The cortico-basal ganglia-thalamo-cortical loop, Brain Research Reviews, vol.20, issue.1, pp.91-127, 1995.
DOI : 10.1016/0165-0173(94)00007-C

J. Parvizi, Corticocentric myopia: old bias in new cognitive sciences, Trends in Cognitive Sciences, vol.13, issue.8, pp.354-359, 2009.
DOI : 10.1016/j.tics.2009.04.008

W. M. Pauli and R. C. Reilly, Attentional control of associative learning???A possible role of the central cholinergic system, Brain Research, vol.1202, pp.43-53, 2008.
DOI : 10.1016/j.brainres.2007.06.097

R. Paz and D. Paré, Physiological basis for emotional modulation of memory circuits by the amygdala, Current Opinion in Neurobiology, vol.23, issue.3, pp.381-386, 2013.
DOI : 10.1016/j.conb.2013.01.008

C. M. Pennartz, R. Ito, P. F. Verschure, F. P. Battaglia, and T. W. Robbins, The hippocampal???striatal axis in learning, prediction and goal-directed behavior, Trends in Neurosciences, vol.34, issue.10, pp.34-548, 2011.
DOI : 10.1016/j.tins.2011.08.001

M. R. Penner and S. J. Mizumori, Neural systems analysis of decision making during goal-directed navigation, Progress in Neurobiology, vol.96, issue.1, pp.96-135, 2012.
DOI : 10.1016/j.pneurobio.2011.08.010

L. Pessoa and R. Adolphs, Emotion processing and the amygdala: from a 'low road' to 'many roads' of evaluating biological significance, Nature Reviews Neuroscience, vol.12, issue.11, pp.773-783, 1038.
DOI : 10.1038/nrn2920

G. Pezzulo and C. Castelfranchi, Thinking as the control of imagination: a conceptual framework for goal-directed systems, Psychological Research Psychologische Forschung, vol.133, issue.2, pp.559-577, 2009.
DOI : 10.1007/s00426-009-0237-z

R. Pfeifer, J. Bongard, and S. Grand, How the body shapes the way we think : a new view of intelligence, 2007.

P. Redgrave, T. J. Prescott, and K. Gurney, The basal ganglia: a vertebrate solution to the selection problem?, Neuroscience, vol.89, issue.4, pp.1009-1023, 1999.
DOI : 10.1016/S0306-4522(98)00319-4

G. Rousselet, S. Thorpe, and M. Fabre-thorpe, How parallel is visual processing in the ventral pathway?, Trends in Cognitive Sciences, vol.8, issue.8, pp.363-370, 2004.
DOI : 10.1016/j.tics.2004.06.003

M. F. Rushworth, M. E. Walton, S. W. Kennerley, and D. M. Bannerman, Action sets and decisions in the medial frontal cortex, Trends in Cognitive Sciences, vol.8, issue.9, pp.410-417, 2004.
DOI : 10.1016/j.tics.2004.07.009

S. Sherman, The thalamus is more than just a relay, Current Opinion in Neurobiology, vol.17, issue.4, pp.417-422, 2007.
DOI : 10.1016/j.conb.2007.07.003

M. Sommer and R. Wurtz, What the Brain Stem Tells the Frontal Cortex. I. Oculomotor Signals Sent From Superior Colliculus to Frontal Eye Field Via Mediodorsal Thalamus, Journal of Neurophysiology, vol.91, issue.3, pp.1381-1402, 2004.
DOI : 10.1152/jn.00738.2003

L. W. Swanson and G. D. Petrovich, What is the amygdala?, Trends in Neurosciences, vol.21, issue.8, pp.323-331, 1998.
DOI : 10.1016/S0166-2236(98)01265-X

W. Taouali, L. Goffart, F. Alexandre, and N. P. Rougier, A parsimonious computational model of visual target position encoding in the superior colliculus, Biological Cybernetics, vol.489, issue.7416, pp.549-559, 2015.
DOI : 10.1007/s00422-015-0660-8
URL : https://hal.archives-ouvertes.fr/hal-01201785

E. Tulving, Episodic and semantic memory. Organization of Memory, 1972.

L. Ungerleider and M. Mishkin, Two cortical visual systems, Analysis of visual behavior, pp.549-586, 1982.

F. Varela, E. Thompson, and E. Rosch, The embodied mind : Cognitive science and human experience, 1991.

P. F. Verschure, C. M. Pennartz, and G. Pezzulo, The why, what, where, when and how of goal-directed choice: neuronal and computational principles, Philosophical Transactions of the Royal Society B: Biological Sciences, vol.2, issue.5, pp.369-20130483, 1655.
DOI : 10.1016/j.brainresbull.2010.11.008

P. Voorn, L. J. Vanderschuren, H. J. Groenewegen, T. W. Robbins, and C. M. Pennartz, Putting a spin on the dorsal???ventral divide of the striatum, Trends in Neurosciences, vol.27, issue.8, pp.27-468, 2004.
DOI : 10.1016/j.tins.2004.06.006

H. H. Yin, S. B. Ostlund, and B. W. Balleine, Reward-guided learning beyond dopamine in the nucleus accumbens: the integrative functions of cortico-basal ganglia networks, European Journal of Neuroscience, vol.30, issue.8, pp.28-1437, 2008.
DOI : 10.1111/j.1460-9568.2008.06422.x