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TiQuant: software for tissue analysis, quantification and surface reconstruction
Abstract : ABSTRACT
Motivation: TiQuant is a modular software tool for efficient quantification
of biological tissues based on volume data obtained by biomedical
image modalities. It includes a number of versatile image
and volume processing chains tailored to the analysis of different
tissue types which have been experimentally verified. TiQuant implements
a novel method for the reconstruction of three-dimensional
surfaces of biological systems, data that often cannot be obtained
experimentally but which is of utmost importance for tissue modelling
in systems biology.
Availability: TiQuant is freely available for non-commercial use at
msysbio.com/tiquant. Windows, OSX and Linux are supported.
Contact: hoehme@uni-leipzig.de
Supplementary information: Supplementary data are available at
Bioinformatics online.
https://hal.inria.fr/hal-01257137
Contributor : Yi Yin <>
Submitted on : Friday, January 15, 2016 - 5:52:52 PM
Last modification on : Friday, March 27, 2020 - 3:16:35 AM
Contributor : Yi Yin <>
Submitted on : Friday, January 15, 2016 - 5:52:52 PM
Last modification on : Friday, March 27, 2020 - 3:16:35 AM
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