L. Chen, G. Wu, J. , and H. , hmChIP: a database and web server for exploring publicly available human and mouse ChIP-seq and ChIP-chip data, Bioinformatics, vol.27, issue.10, pp.1447-1448, 2011.
DOI : 10.1093/bioinformatics/btr156

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3087956

J. Qin, M. J. Li, P. Wang, M. Q. Zhang, W. et al., ChIP-Array: combinatory analysis of ChIP-seq/chip and microarray gene expression data to discover direct/indirect targets of a transcription factor, Nucleic Acids Research, vol.39, issue.suppl, pp.430-436, 2011.
DOI : 10.1093/nar/gkr332

C. Lepoivre, A. Bergon, F. Lopez, N. Perumal, C. Nguyen et al., TranscriptomeBrowser 3.0: introducing a new compendium of molecular interactions and a new visualization tool for the study of gene regulatory networks, BMC Bioinformatics, vol.13, issue.1, 2012.
DOI : 10.1016/j.cell.2008.04.043

URL : https://hal.archives-ouvertes.fr/inserm-00676438

B. Qin, M. Zhou, Y. Ge, L. Taing, T. Liu et al., CistromeMap: a knowledgebase and web server for ChIP-Seq and DNase-Seq studies in mouse and human, Bioinformatics, vol.28, issue.10, pp.1411-1412, 2012.
DOI : 10.1093/bioinformatics/bts157

H. Sun, B. Qin, T. Liu, Q. Wang, J. Liu et al., CistromeFinder for ChIP-seq and DNase-seq data reuse, Bioinformatics, vol.29, issue.10, pp.1352-1354, 2013.
DOI : 10.1093/bioinformatics/btt135

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3654708

L. Bovolenta, M. Acencio, and N. Lemke, HTRIdb: an open-access database for experimentally verified human transcriptional regulation interactions, BMC Genomics, vol.13, issue.1, p.405, 2012.
DOI : 10.1186/1471-2164-11-S5-S9

URL : http://doi.org/10.1186/1471-2164-13-405

S. Pepke, B. Wold, and A. Mortazavi, Computation for ChIP-seq and RNA-seq studies, Nature Methods, vol.18, issue.11s, pp.22-32, 2009.
DOI : 10.1038/nmeth.1360

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4121056

C. Zang, D. E. Schones, C. Zeng, K. Cui, K. Zhao et al., A clustering approach for identification of enriched domains from histone modification ChIP-Seq data, Bioinformatics, vol.25, issue.15, pp.1952-1958, 2009.
DOI : 10.1093/bioinformatics/btp340

E. The and . Project, An integrated encyclopedia of DNA elements in the human genome, Nature, vol.489, pp.57-74, 2012.

E. Y. Chen, C. Tan, Y. Kou, Q. Duan, Z. Wang et al., Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool, BMC Bioinformatics, vol.14, issue.1, 2013.
DOI : 10.1126/science.1076997

URL : http://doi.org/10.1186/1471-2105-14-128

C. Tan, E. Y. Chen, R. Dannenfelser, N. R. Clark, and A. Ma-'ayan, Network2Canvas: network visualization on a canvas with enrichment analysis, Bioinformatics, vol.29, issue.15, 2013.
DOI : 10.1093/bioinformatics/btt319

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3712222

S. Berger, J. Posner, and A. Ma-'ayan, Genes2Networks: connecting lists of gene symbols using mammalian protein interactions databases, BMC Bioinformatics, vol.8, issue.1, p.372, 2007.
DOI : 10.1186/1471-2105-8-372

J. Eppig, J. Blake, C. Bult, J. Kadin, and J. Richardson, The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse, Nucleic Acids Research, vol.40, issue.D1, pp.881-86, 2012.
DOI : 10.1093/nar/gkr974

M. Decressac, B. Mattsson, P. Weikop, M. Lundblad, J. Jakobsson et al., TFEB-mediated autophagy rescues midbrain dopamine neurons from ??-synuclein toxicity, Proceedings of the National Academy of Sciences, vol.200, issue.1, pp.1817-1843, 2013.
DOI : 10.1016/j.jneumeth.2011.06.012

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3651458