Maternally deposited germline piRNAs silence the tirant retrotransposon in somatic cells, EMBO reports, vol.34, issue.5, pp.458-464, 2013. ,
DOI : 10.1038/embor.2013.38
URL : https://hal.archives-ouvertes.fr/hal-00850319
tirant, a Newly Discovered Active Endogenous Retrovirus in Drosophila simulans, Journal of Virology, vol.86, issue.7, pp.3675-3681, 2012. ,
DOI : 10.1128/JVI.07146-11
URL : https://hal.archives-ouvertes.fr/hal-00763499
An Epigenetic Role for Maternally Inherited piRNAs in Transposon Silencing, Science, vol.2, issue.3, pp.1387-1392, 2008. ,
DOI : 10.1073/pnas.0508192102
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2805124
Tissue-specificity of 412 retrotransposon expression in Drosophila simulans and D. melanogaster, Heredity, vol.89, issue.4, pp.247-252, 2002. ,
DOI : 10.1038/sj.hdy.6800135
URL : https://hal.archives-ouvertes.fr/hal-00427312
I transposable elements and I-R hybrid dysgenesis in Drosophila, Trends in Genetics, vol.6, pp.16-21, 1990. ,
DOI : 10.1016/0168-9525(90)90044-7
Non-mendelian female sterility in Drosophila melanogaster: Quantitative variations in the efficiency of inducer and reactive strains, Heredity, vol.36, issue.3, pp.305-314, 1976. ,
DOI : 10.1038/hdy.1976.38
The molecular basis of I-R hybrid Dysgenesis in drosophila melanogaster: Identification, cloning, and properties of the I factor, Cell, vol.38, issue.1, pp.153-163, 1984. ,
DOI : 10.1016/0092-8674(84)90536-1
I elements and the Drosophila genome, Genetica, vol.8, issue.1-3, pp.175-190, 1992. ,
DOI : 10.1007/BF00133719
Analysis of transposons and repeat composition of the sunflower (Helianthus annuus L.) genome, Theoretical and Applied Genetics, vol.169, issue.3, pp.491-508, 2010. ,
DOI : 10.1007/s00122-009-1170-7
Identification of a potential RNA intermediate for transposition of the LINE-like element I factor in Drosophila melanogaster, EMBO J, vol.9, pp.3557-3563, 1990. ,
IR hybrid dysgenesis increases the frequency of recombination in Drosophila melanogaster, Genetical Research, vol.268, issue.03, pp.167-174, 1995. ,
DOI : 10.1093/nar/11.18.6341
piRNA-mediated nuclear accumulation of retrotransposon transcripts in the Drosophila female germline, Proceedings of the National Academy of Sciences, vol.3, issue.9, pp.14964-14969, 2008. ,
DOI : 10.1073/pnas.0508192102
URL : https://hal.archives-ouvertes.fr/hal-00331712
Spatio-temporal requirements for transposable element piRNA-mediated silencing during Drosophila oogenesis, Nucleic Acids Research, vol.42, issue.4, pp.1-13, 2013. ,
DOI : 10.1093/nar/gkt1184
URL : https://hal.archives-ouvertes.fr/hal-01332537
High Genetic Differentiation between the M and S Molecular Forms of Anopheles gambiae in Africa, PLoS ONE, vol.28, issue.2, p.1968, 2008. ,
DOI : 10.1371/journal.pone.0001968.s002
URL : https://hal.archives-ouvertes.fr/hal-00428192
Transposable elements controlling I-R hybrid dysgenesis in D. melanogaster are similar to mammalian LINEs, Cell, vol.47, issue.6, pp.1007-1015, 1986. ,
DOI : 10.1016/0092-8674(86)90815-9
Hybrid genome evolution by transposition, Cytogenetic and Genome Research, vol.110, issue.1-4, pp.49-55, 2005. ,
DOI : 10.1159/000084937
Genetic control of cell proliferation and differentiation inDrosophilaspermatogenesis, Seminars in Cell & Developmental Biology, vol.9, issue.4, pp.433-444, 1998. ,
DOI : 10.1006/scdb.1998.0227
The evolutionary dynamics of the Helena retrotransposon revealed by sequenced Drosophila genomes, BMC Evolutionary Biology, vol.9, issue.1, p.11, 2009. ,
DOI : 10.1186/1471-2148-9-174
URL : https://hal.archives-ouvertes.fr/hal-00428408
Vertical inheritance and bursts of transposition have shaped the evolution of the BS non-LTR retrotransposon in Drosophila, Molecular Genetics and Genomics, vol.106, issue.2, pp.57-66, 2011. ,
DOI : 10.1007/s00438-011-0629-9
URL : https://hal.archives-ouvertes.fr/hal-00698393
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0, Systematic Biology, vol.59, issue.3, pp.307-321, 2010. ,
DOI : 10.1093/sysbio/syq010
URL : https://hal.archives-ouvertes.fr/lirmm-00511784
BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT, Nucleic Acids Symp Ser, vol.41, pp.95-98, 1999. ,
Non-long terminal repeat (non-LTR) retrotransposons: mechanisms, recent developments, and unanswered questions, Mobile DNA, vol.1, issue.1, p.15, 2010. ,
DOI : 10.1186/1759-8753-1-15
URL : http://doi.org/10.1186/1759-8753-1-15
Developmental expression analysis of the 1731 retrotransposon reveals an enhancement of Gag???Pol frameshifting in males of Drosophila melanogaster, Gene, vol.196, issue.1-2, pp.83-93, 1997. ,
DOI : 10.1016/S0378-1119(97)00203-5
Argonaute protein PIWI controls mobilization of retrotransposons in the Drosophila male germline, Nucleic Acids Research, vol.33, issue.6, pp.2052-2059, 2005. ,
DOI : 10.1093/nar/gki323
A universal classification of eukaryotic transposable elements implemented in Repbase, Nature Reviews Genetics, vol.8, issue.5, pp.411-412, 2008. ,
DOI : 10.1038/nrg2165-c1
Drosophila Interspecific Hybrids Phenocopy piRNA-Pathway Mutants, PLoS Biology, vol.18, issue.11, p.1001428, 2012. ,
DOI : 10.1371/journal.pbio.1001428.s022
URL : http://doi.org/10.1371/journal.pbio.1001428
Cis-acting regions sufficient for spermatocyte specific transcriptional and spermatid-specific translational control of the Drosophila melanogaster gene mst, p.9, 1988. ,
Adaptation to P Element Transposon Invasion in Drosophila melanogaster, Cell, vol.147, issue.7, pp.1551-1563, 2011. ,
DOI : 10.1016/j.cell.2011.11.042
URL : http://doi.org/10.1016/j.cell.2011.11.042
Evolution of hybrid dysgenesis determinants in Drosophila melanogaster, Proceedings of the National Academy of Sciences, vol.80, issue.6, pp.1655-1659, 1983. ,
DOI : 10.1073/pnas.80.6.1655
Sterility resulting from gonadal dysgenesis in the P?M system, Genetics, vol.92, pp.1127-1140, 1979. ,
The GATE retrotransposon in Drosophila melanogaster: mobility in heterochromatin and aspects of its expression in germline tissues, Molecular Genetics and Genomics, vol.34, issue.2, pp.234-242, 2003. ,
DOI : 10.1007/s004380050675
The age and evolution of non-LTR retrotransposable elements, Molecular Biology and Evolution, vol.16, issue.6, pp.793-805, 1999. ,
DOI : 10.1093/oxfordjournals.molbev.a026164
Striking structural dynamism and nucleotide sequence variation of the transposon Galileo in the genome of Drosophila mojavensis, Mobile DNA, vol.4, issue.1, pp.1-13, 2013. ,
DOI : 10.1007/s00412-006-0071-7
Sympatry, allopatry and sexual isolation between Drosophila mojavensis and D. arizonae, Hereditas, vol.34, issue.2005, pp.51-55, 2005. ,
DOI : 10.1111/j.1601-5223.2005.01911.x
Multiple downstream promoter modules regulate the transcription of the Drosophila melanogaster I, doc and F elements, Journal of Molecular Biology, vol.267, issue.1, pp.37-46, 1997. ,
DOI : 10.1006/jmbi.1996.0860
Impact of the Regulatory Regions of Retrotransposon copia on the Level of Its Expression in Testes of Drosophila melanogaster, Russian Journal of Genetics, vol.40, issue.2, pp.119-124, 2004. ,
DOI : 10.1023/B:RUGE.0000016984.82723.d3
Determination of gene expression patterns using in situ hybridization to Drosophila testes, Nature Protocols, vol.44, issue.12, pp.1807-1819, 2009. ,
DOI : 10.1038/nprot.2009.55
Genomic Instability of I Elements of Drosophila melanogaster in Absence of Dysgenic Crosses, PLoS ONE, vol.5, issue.10, p.13142, 2010. ,
DOI : 10.1371/journal.pone.0013142.t002
IRE-Bubble PCR: A Rapid Method for Efficient and Representative Amplification of Human Genomic DNA Sequences from Complex Sources, Genomics, vol.19, issue.3, pp.506-514, 1994. ,
DOI : 10.1006/geno.1994.1100
Non mendelian female sterility in Drosophila melanogaster: I-factor mapping on inducer chromosomes, Genetica, vol.29, issue.2, pp.141-148, 1979. ,
DOI : 10.1007/BF00123290
Non-mendelian female sterility in Drosophila melanogaster: hereditary transmission of I factor, Genetics, vol.83, pp.107-123, 1976. ,
Non-mendelian female sterility and hybrid dysgenesis in Drosophila melanogaster, Genetical Research, vol.81, issue.03, pp.275-287, 1978. ,
DOI : 10.2307/2405334
Early events in speciation: Polymorphism for hybrid male sterility in Drosophila, Proceedings of the National Academy of Sciences, vol.167, issue.1, pp.9009-9012, 2004. ,
DOI : 10.1534/genetics.167.1.207
Evolution of the Mojavensis Cluster of Cactophilic Drosophila with Descriptions of Two New Species, Journal of Heredity, vol.81, issue.1, 1990. ,
DOI : 10.1093/oxfordjournals.jhered.a110922
Polytene Chromosomal Maps of 11 Drosophila Species: The Order of Genomic Scaffolds Inferred From Genetic and Physical Maps, Genetics, vol.179, issue.3, pp.1601-1655, 2008. ,
DOI : 10.1534/genetics.107.086074
High-frequency retrotransposition of a marked I factor in Drosophila melanogaster correlates with a dynamic expression pattern of the ORF1 protein in the cytoplasm of oocytes, Genetics, vol.151, pp.761-771, 1999. ,
In vivo RNA localization of I factor, a non-LTR retrotransposon, requires a cis-acting signal in ORF2 and ORF1 protein, Nucleic Acids Research, vol.33, issue.2, pp.776-785, 2005. ,
DOI : 10.1093/nar/gki221
Extensive individual variation in L1 retrotransposition capability contributes to human genetic diversity, Proceedings of the National Academy of Sciences, vol.16, issue.19, pp.6611-6616, 2006. ,
DOI : 10.1093/emboj/16.19.6034
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1458931
The piRNA pathway: a fly's perspective on the guardian of the genome, Trends in Genetics, vol.26, issue.12, pp.499-509, 2010. ,
DOI : 10.1016/j.tig.2010.08.007
Transposable and nontransposable elements similar to the I factor involved in inducer-reactive (IR) hybrid dysgenesis in Drosophila melanogaster coexist in various Drosophila species., Proceedings of the National Academy of Sciences, vol.85, issue.4, pp.1141-1145, 1988. ,
DOI : 10.1073/pnas.85.4.1141
The structure of hobo transposable elements and their insertion sites, EMBO J, vol.5, pp.3615-3623, 1986. ,
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods, Molecular Biology and Evolution, vol.28, issue.10, pp.2731-2739, 2011. ,
DOI : 10.1093/molbev/msr121
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3203626
Proliferation of Ty3/gypsy-like retrotransposons in hybrid sunflower taxa inferred from phylogenetic data, BMC Biology, vol.7, issue.1, p.40, 2009. ,
DOI : 10.1186/1741-7007-7-40
Molecular characteristics of the heterochromatic I elements from a reactive strain ofDrosophila melanogaster, Journal of Molecular Evolution, vol.98, issue.5, pp.424-431, 1990. ,
DOI : 10.1007/BF02106056
A Genome-Wide Survey of Genetic Instability by Transposition in Drosophila Hybrids, PLoS ONE, vol.91, issue.2, p.88992, 2014. ,
DOI : 10.1371/journal.pone.0088992.s005
URL : https://hal.archives-ouvertes.fr/hal-01092626
Character Displacement for Sexual Isolation Between Drosophila mojavensis and Drosophila arizonensis, Evolution, vol.31, issue.4, pp.812-823, 1977. ,
DOI : 10.2307/2407442
A unified classification system for eukaryotic transposable elements, Nature Reviews Genetics, vol.8, issue.12, pp.973-982, 2007. ,
DOI : 10.1038/nrg2165
URL : https://hal.archives-ouvertes.fr/hal-00169819