P. Keller, Imaging Morphogenesis: Technological Advances and Biological Insights, Science, vol.340, issue.6137, p.1234168, 2013.
DOI : 10.1126/science.1234168

L. Guignard, C. Godin, . Fiuza, . Hufnagel, G. Lemaire et al., Spatio-temporal registration of embryo images, 2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI), 2014.
DOI : 10.1109/ISBI.2014.6867986

URL : https://hal.archives-ouvertes.fr/hal-00919142

G. Michelin, . Guignard, . Um-fiuza, C. Lemaire, G. Godin et al., Cell pairings for ascidian embryo registration, 2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI), 2015.
DOI : 10.1109/ISBI.2015.7163872

URL : https://hal.archives-ouvertes.fr/hal-01113166

M. Barton and R. Poethig, Formation of the shoot apical meristem in arabidopsis thaliana: an analysis of development in the wild type and in the shoot meristemless mutant, Development, vol.119, issue.3, pp.823-831, 1993.

J. Legrand, Toward a multi-scale understanding of flower developmentfrom auxin networks to dynamic cellular patterns, 2014.

B. Landrein, Y. Refahi, . Besnard, . Hervieux, . Mirabet et al., Meristem size contributes to the robustness of phyllotaxis in Arabidopsis, Journal of Experimental Botany, vol.66, issue.5, p.482, 2014.
DOI : 10.1093/jxb/eru482

R. Fernandez, . Das, . Mirabet, . Moscardi, . Traas et al., Imaging plant growth in 4D: robust tissue reconstruction and lineaging at cell resolution, Nature Methods, vol.19, issue.7, pp.547-553, 2010.
DOI : 10.1038/nmeth.1472

URL : https://hal.archives-ouvertes.fr/hal-00521491

G. Michelin, . Guignard, G. Fiuza, and . Malandain, Embryo cell membranes reconstruction by tensor voting, 2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI), 2014.
DOI : 10.1109/ISBI.2014.6868105

URL : https://hal.archives-ouvertes.fr/hal-00915000

P. Besl and N. Mckay, A method for registration of 3-D shapes, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.14, issue.2, pp.239-256, 1992.
DOI : 10.1109/34.121791

P. Rousseeuw and A. Leroy, Robust Regression and Outlier Detection, 1987.
DOI : 10.1002/0471725382

G. Flandin, . Kherif, . Pennec, . Drivì-ere, J. Ayache et al., Parcellation of brain images with anatomical and functional constraints for fMRI data analysis, Proceedings IEEE International Symposium on Biomedical Imaging, pp.907-910, 2002.
DOI : 10.1109/ISBI.2002.1029408

URL : https://hal.archives-ouvertes.fr/inria-00615916

J. Bentley, Multidimensional binary search trees used for associative searching, Communications of the ACM, vol.18, issue.9, pp.509-517, 1975.
DOI : 10.1145/361002.361007

S. Ourselin, . Roche, N. Prima, and . Ayache, Block Matching: A??General??Framework??to??Improve Robustness of??Rigid??Registration of Medical Images, MICCAI, pp.557-566, 1935.
DOI : 10.1007/978-3-540-40899-4_57

URL : https://hal.archives-ouvertes.fr/inria-00615860