Generalized string matching, SIAM J. Comput, vol.16, issue.6, pp.1039-1051, 1987. ,
Palindromic decompositions with gaps and errors, CSR, vol.10304, pp.48-61, 2017. ,
DOI : 10.1007/978-3-319-58747-9_7
URL : http://arxiv.org/pdf/1703.08931
Maximal palindromic factorization, PSC, pp.70-77, 2013. ,
On avoided words, absent words, and their application to biological sequence analysis, Algorithms for Molecular Biology, vol.12, issue.1, p.5, 2017. ,
DOI : 10.1186/s13015-017-0094-z
URL : https://doi.org/10.1186/s13015-017-0094-z
Efficient computation of palindromes in sequences with uncertainties, EANN, vol.744, pp.620-629, 2017. ,
Parallel detection of all palindromes in a string, Theoretical Computer Science, vol.141, issue.1, pp.163-173, 1995. ,
The LCA problem revisited, LATIN, volume 1776 of LNCS, pp.88-94, 2000. ,
Pattern matching on elastic-degenerate text with errors, SPIRE, volume 10508 of LNCS, pp.74-90, 2017. ,
DOI : 10.1007/978-3-319-67428-5_7
URL : https://hal.archives-ouvertes.fr/hal-01673585
Palindromic Length in Linear Time, 12. Schloss DagstuhlLeibniz-Zentrum fuer Informatik, vol.23, pp.1-23, 2017. ,
, The Computational Pan-Genomics Consortium. Computational pan-genomics: status, promises and challenges, Briefings in Bioinformatics, vol.21, p.13, 2016.
Covering problems for partial words and for indeterminate strings, Theoretical Computer Science, vol.698, pp.25-39, 2017. ,
DOI : 10.1016/j.tcs.2017.05.026
URL : http://arxiv.org/pdf/1412.3696
Optimal suffix tree construction with large alphabets, FOCS, pp.137-143, 1997. ,
DOI : 10.1109/sfcs.1997.646102
A subquadratic algorithm for minimum palindromic factorization, Journal of Discrete Algorithms, vol.28, pp.41-48, 2014. ,
DOI : 10.1016/j.jda.2014.08.001
URL : https://doi.org/10.1016/j.jda.2014.08.001
Finding functional sequence elements by multiple local alignment, Nucleic Acids Res, vol.32, issue.1, pp.189-200, 2004. ,
The genetic control of immunoglobulin synthesis, Annual Review of Genetics, vol.6, issue.1, pp.1-46, 1972. ,
DOI : 10.1146/annurev.ge.06.120172.000245
Orthogonal vectors is hard for first-order properties on sparse graphs, Electronic Colloquium on Computational Complexity (ECCC), vol.23, p.53, 2016. ,
On-line pattern matching on a set of similar texts, CPM, LIPIcs. Schloss Dagstuhl-Leibniz-Zentrum fuer Informatik, 2017. ,
, Algorithms on Strings, Trees, and Sequences: Computer Science and Computational Biology, 1997.
Efficient pattern matching in elasticdegenerate texts, LATA, volume 10168 of LNCS, pp.131-142, 2017. ,
Truly Subquadratic-Time Extension Queries and Periodicity Detection in Strings with Uncertainties, CPM, volume 54 of LIPIcs, vol.8, 2016. ,
On the complexity of k-sat, J. Comput. Syst. Sci, vol.62, issue.2, pp.367-375, 2001. ,
Which problems have strongly exponential complexity?, J. Comput. Syst. Sci, vol.63, issue.4, pp.512-530, 2001. ,
Commission on Biochemical Nomenclature. Abbreviations and symbols for nucleic acids, polynucleotides, and their constituents, Biochemistry, vol.9, issue.20, pp.4022-4027, 1970. ,
On The Intersection of Finite Automata, pp.145-148, 2010. ,
A new linear-time "on-line" algorithm for finding the smallest initial palindrome of a string, Journal of the ACM, vol.22, issue.3, pp.346-351, 1975. ,
Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes, Nucleic Acids Res, vol.29, issue.3, pp.774-782, 2001. ,
Evidence of pervasive biologically functional secondary structures within the genomes of eukaryotic single-stranded DNA viruses, Journal of virology, vol.88, issue.4, pp.1972-1989, 2014. ,
Approximate matching of network expressions with spacers, Journal of Computational Biology, vol.3, issue.1, pp.33-51, 1996. ,
A relational extension of the notion of motifs: Application to the common 3d protein substructures searching problem, Journal of Computational Biology, vol.16, issue.12, pp.1635-1660, 2009. ,
URL : https://hal.archives-ouvertes.fr/hal-00618073