J. Abella, D. M. Alba, J. M. Robles, A. Valenciano, C. Rotgers et al., Kretzoiarctos gen. nov., the oldest member of the giant panda clade, PLoS One, vol.17, p.48985, 2012.

J. Barido-sottani, G. Aguirre-fernández, M. J. Hopkins, T. Stadler, and R. Warnock, Ignoring stratigraphic age uncertainty leads to erroneous estimates of species divergence times under the fossilized birth-death process, Proceedings of the Royal Society B: Biological Sciences, vol.286, p.20190685, 1902.

R. Bouckaert, J. Heled, D. Kühnert, T. Vaughan, C. Wu et al., BEAST 2: a software platform for Bayesian evolutionary analysis, PLoS Computational Biology, vol.10, issue.4, p.1003537, 2014.

L. ;. Bromham, F. Delsuc, and N. Galtier, Substitution rate analysis and molecular evolution, Phylogenetics in the Genomic Era, 2020.
URL : https://hal.archives-ouvertes.fr/hal-02536329

F. L. Condamine, J. Rolland, S. Höhna, F. A. Sperling, and I. Sanmartín, Testing the role of the Red Queen and Court Jester as drivers of the macroevolution of Apollo butterflies, Systematic Biology, vol.67, issue.6, pp.940-964, 2018.
URL : https://hal.archives-ouvertes.fr/hal-02323593

M. Dos-reis, J. Inoue, M. Hasegawa, R. J. Asher, P. C. Donoghue et al., Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny, Proceedings of the Royal Society B: Biological Sciences, vol.279, pp.3491-3500, 1742.

A. Drummond, M. Suchard, D. Xie, and A. Rambaut, Bayesian phylogenetics with BEAUti and the BEAST 1.7, Molecular Biology and Evolution, vol.29, pp.1969-1973, 2012.

W. A. Freyman and S. Höhna, Cladogenetic and anagenetic models of chromosome number evolution: a Bayesian model averaging approach, Systematic Biology, vol.67, issue.2, pp.1995-215, 2018.

W. A. Freyman and S. Höhna, Stochastic character mapping of state-dependent diversification reveals the tempo of evolutionary decline in self-compatible Onagraceae lineages, Systematic Biology, vol.68, issue.3, p.505519, 2019.

A. Gavryushkina, T. A. Heath, D. T. Ksepka, T. Stadler, D. Welch et al., Bayesian total-evidence dating reveals the recent crown radiation of penguins, Systematic Biology, vol.66, pp.57-73, 2017.

T. A. Heath, J. P. Huelsenbeck, and T. Stadler, The fossilized birth-death process for coherent calibration of divergence-time estimates, Proceedings of the National Academy of Sciences, vol.111, issue.29, pp.2957-2966, 2014.

S. Höhna, The time-dependent reconstructed evolutionary process with a key-role for mass-extinction events, Journal of Theoretical Biology, vol.380, pp.321-331, 2015.

S. Höhna, L. M. Coghill, G. G. Mount, R. C. Thomson, and J. M. Brown, , 2018.

, Phylogenetic posterior prediction in RevBayes, Molecular Biology and Evolution, vol.3, issue.4, pp.1028-1034

S. Höhna, W. A. Freyman, Z. Nolen, J. P. Huelsenbeck, M. R. May et al., A Bayesian approach for estimating branch-specific speciation and extinction rates, 2019.

S. Höhna, T. A. Heath, B. Boussau, M. J. Landis, F. Ronquist et al., Probabilistic graphical model representation in phylogenetics, Systematic Biology, vol.63, issue.5, pp.753-771, 2014.

S. Höhna, M. J. Landis, T. A. Heath, B. Boussau, N. Lartillot et al., RevBayes: Bayesian phylogenetic inference using graphical models and an interactive model-specification language, Systematic Biology, vol.65, issue.4, pp.726-736, 2016.

T. Jukes and C. Cantor, Evolution of protein molecules, Mammalian Protein Metabolism, vol.3, pp.21-132, 1969.

D. G. Kendall, On the generalized "birth-and-death" process, The Annals of Mathematical Statistics, vol.19, issue.1, pp.1-15, 1948.

N. ;. Lartillot, F. Delsuc, and N. Galtier, The bayesian approach to molecular phylogeny, Phylogenetics in the Genomic Era, 2020.
URL : https://hal.archives-ouvertes.fr/hal-02535330

P. O. Lewis, A likelihood approach to estimating phylogeny from discrete morphological character data, Systematic Biology, vol.50, issue.6, pp.913-925, 2001.

W. Maddison, P. Midford, and S. Otto, Estimating a binary character's effect on speciation and extinction, Systematic Biology, vol.56, issue.5, p.701, 2007.

S. Nee, R. M. May, and P. H. Harvey, The Reconstructed Evolutionary Process, Philosophical Transactions: Biological Sciences, vol.344, pp.305-311, 1309.

W. Pett and T. A. Heath, Inferring the timescale of phylogenetic trees from fossil data, 2020.
URL : https://hal.archives-ouvertes.fr/hal-02536361

T. Pupko and I. Mayrose, A gentle introduction to probabilistic evolutionary models, Phylogenetics in the Genomic Era, 2020.
URL : https://hal.archives-ouvertes.fr/hal-02535102

. R-core-team, R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, 2020.

A. Rambaut, A. J. Drummond, D. Xie, G. Baele, and M. A. Suchard, Posterior summarization in Bayesian phylogenetics using Tracer 1.7. Systematic Biology, vol.67, pp.901-904, 2018.

F. Ronquist and J. Huelsenbeck, MrBayes 3: Bayesian phylogenetic inference under mixed models, Bioinformatics, vol.19, issue.12, pp.1572-1574, 2003.

F. Ronquist, S. Klopfstein, L. Vilhelmsen, S. Schulmeister, D. L. Murray et al., A total-evidence approach to dating with fossils, applied to the early radiation of the Hymenoptera, Systematic Biology, issue.6, pp.973-999, 2012.

T. Stadler, Sampling-through-time in birth-death trees, Journal of Theoretical Biology, vol.267, issue.3, pp.396-404, 2010.

T. Stadler, A. Gavryushkina, R. C. Warnock, A. J. Drummond, and T. A. Heath, The fossilized birth-death model for the analysis of stratigraphic range data under different speciation modes, Journal of Theoretical Biology, vol.447, pp.41-55, 2018.

E. A. Thompson, Human Evolutionary Trees, 1975.

T. G. Vaughan, IcyTree: rapid browser-based visualization for phylogenetic trees and networks, Bioinformatics, vol.33, issue.15, pp.2392-2394, 2017.

A. M. Wright, A systematist's guide to estimating Bayesian phylogenies from morphological data, Insect systematics and diversity, vol.3, issue.3, p.2, 2019.

A. M. Wright, G. T. Lloyd, and D. M. Hillis, Modeling character change heterogeneity in phylogenetic analyses of morphology through the use of priors, Systematic Biology, vol.65, issue.4, pp.602-611, 2016.

, REFERENCES 5, vol.2, p.23

Z. Yang, Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods, Journal of Molecular Evolution, vol.39, issue.3, pp.306-314, 1994.

C. Zhang, T. Stadler, S. Klopfstein, T. A. Heath, and F. Ronquist, Total-evidence dating under the fossilized birth-death process, Systematic Biology, vol.65, issue.2, pp.228-249, 2016.

E. Zuckerkandl and L. Pauling, Molecular disease, evolution, and genetic heterogeneity, Horizons in Biochemistry, pp.189-225, 1962.