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Calibration-Less Multi-Coil Compressed Sensing Magnetic Resonance Image Reconstruction Based on OSCAR Regularization

Loubna El Gueddari 1, 2 Chaithya Giliyar Radhakrishna 1, 2 Emilie Chouzenoux 3 Philippe Ciuciu 1, 2 
2 PARIETAL - Modelling brain structure, function and variability based on high-field MRI data
NEUROSPIN - Service NEUROSPIN, Inria Saclay - Ile de France
3 OPIS - OPtimisation Imagerie et Santé
Inria Saclay - Ile de France, CVN - Centre de vision numérique
Abstract : Over the last decade, the combination of compressed sensing (CS) with acquisition over multiple receiver coils in magnetic resonance imaging (MRI) has allowed the emergence of faster scans while maintaining a good signal-to-noise ratio (SNR). Self-calibrating techniques, such as ESPiRIT, have become the standard approach to estimating the coil sensitivity maps prior to the reconstruction stage. In this work, we proceed differently and introduce a new calibration-less multi-coil CS reconstruction method. Calibration-less techniques no longer require the prior extraction of sensitivity maps to perform multi-coil image reconstruction but usually alternate estimation sensitivity map estimation and image reconstruction. Here, to get rid of the nonconvexity of the latter approach we reconstruct as many MR images as the number of coils. To compensate for the ill-posedness of this inverse problem, we leverage structured sparsity of the multi-coil images in a wavelet transform domain while adapting to variations in SNR across coils owing to the OSCAR (octagonal shrinkage and clustering algorithm for regression) regularization. Coil-specific complex-valued MR images are thus obtained by minimizing a convex but nonsmooth objective function using the proximal primal-dual Condat-Vù algorithm. Comparison and validation on retrospective Cartesian and non-Cartesian studies based on the Brain fastMRI data set demonstrate that the proposed reconstruction method outperforms the state-of-the-art (ℓ1-ESPIRiT, calibration-less AC-LORAKS and CaLM methods) significantly on magnitude images for the T1 and FLAIR contrasts. Additionally, further validation operated on 8 to 20-fold prospectively accelerated high-resolution ex vivo human brain MRI data collected at 7 Tesla confirms the retrospective results. Overall, OSCAR-based regularization preserves phase information more accurately (both visually and quantitatively) compared to other approaches, an asset that can only be assessed on real prospective experiments.
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https://hal.inria.fr/hal-03366158
Contributor : Philippe Ciuciu Connect in order to contact the contributor
Submitted on : Tuesday, October 5, 2021 - 3:19:10 PM
Last modification on : Friday, July 8, 2022 - 10:10:41 AM

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Loubna El Gueddari, Chaithya Giliyar Radhakrishna, Emilie Chouzenoux, Philippe Ciuciu. Calibration-Less Multi-Coil Compressed Sensing Magnetic Resonance Image Reconstruction Based on OSCAR Regularization. Journal of Imaging, MDPI, 2021, 7 (3), pp.58. ⟨10.3390/jimaging7030058⟩. ⟨hal-03366158⟩

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