C. Lawrence, S. Altschul, M. Bogouski, J. Liu, A. Neuwald et al., Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment, Science, vol.262, issue.5131, pp.208-214, 1993.
DOI : 10.1126/science.8211139

L. Grate, R. Hughey, and K. Karplus, Sjölander K ? Stochastic Modeling Techniques: Understanding and using hidden Markov models ? University of California, 1996.

I. Jonassen and J. Collins, Finding flexible patterns in unaligned protein sequences, Protein Science, vol.22, issue.8, pp.1587-1595, 1995.
DOI : 10.1002/pro.5560040817

A. Brazma, I. Jonassen, and I. Eidhammer, Ukkonen E ? Relation patterns and their automatic discovery in biosequences ? Dept, Reports in Informatics, vol.135, 1997.

W. Taylor, The classification of amino acid conservation, Journal of Theoretical Biology, vol.119, issue.2, pp.205-223, 1986.
DOI : 10.1016/S0022-5193(86)80075-3

K. Lang, B. Pearlmutter, and P. R. , ? Results of the Abbadingo one DFA learning competition and a new evidence-driven state merging algorithm ? In Grammatical Inference, number 1433 in, Lecture Notes in Artificial Intelligence, pp.1-12, 1998.

B. Morgenstern, DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment, Bioinformatics, vol.15, issue.3, pp.211-218, 1999.
DOI : 10.1093/bioinformatics/15.3.211

I. Lerman, J. Azé, and R. Rsti-série, Une mesure probabiliste contextuelle discriminante de qualité des règles d'association ? dans EGC2003, pp.247-262, 2003.

P. Agre, D. Kozono, and ?. Febs-lett, Aquaporin water channels: molecular mechanisms for human diseases, pp.72-78, 2003.

H. Sui, B. Han, J. Lee, and P. Walian, Jap BK ? Structural basis of water-specific transport through the AQP1 water channel ? Nature, pp.872-880, 2001.

D. Fu, A. Libson, L. Miercke, C. Weitzman, P. Nollert et al., ? Structure of a glycerol-conducting channel and the basis for its selectivity ? Science, pp.481-487, 2000.

Y. Fujiyoshi, K. Mitsuoka, B. De-groot, A. Philippsen, H. Grubmuller et al., Structure and Function of Water Channels, Current Opinion in Structural Biology, vol.12, issue.4, pp.509-524, 2002.
DOI : 10.1016/S0959-440X(02)00355-X

R. Stroud, L. Miercke, O. Connell, J. Khademi, S. Lee et al., Glycerol facilitator GlpF and the associated aquaporin family of channels, Current Opinion in Structural Biology, vol.13, issue.4, pp.424-455, 2003.
DOI : 10.1016/S0959-440X(03)00114-3