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A Preliminary Work on Evolutionary Identification of Protein Variants and New Proteins on Grids

Abstract : Protein identification is one of the major task of Proteomics researchers. Protein identification could be resumed by searching the best match between an experimental mass spectrum and proteins from a database. Nevertheless this approach can not be used to identify new proteins or protein variants. In this paper an evolutionary approach is proposed to discover new proteins or protein variants thanks a "de novo sequencing" method. This approach has been experimented on a specific grid called Grid5000 with simulated spectra and also real spectra.
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https://hal.inria.fr/inria-00270867
Contributor : Jean-Charles Boisson <>
Submitted on : Tuesday, April 8, 2008 - 9:38:13 AM
Last modification on : Thursday, May 28, 2020 - 9:22:09 AM
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  • HAL Id : inria-00270867, version 1
  • ARXIV : 0804.1202

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Jean-Charles Boisson, Laetitia Jourdan, El-Ghazali Talbi, Christian Rolando. A Preliminary Work on Evolutionary Identification of Protein Variants and New Proteins on Grids. AINA 2006, HIPCOMB Workshop, Apr 2006, Vienne, Austria. ⟨inria-00270867⟩

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