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Journal articles
HalX: an open-source LIMS (Laboratory Information Management System) for small- to large-scale laboratories.
Jaime Prilusky
1
Eric Oeuillet
2
Nathalie Ulryck
2
Anne Pajon
3
Julie Bernauer
2
Isabelle Krimm
4
Sophie Quevillon-Cheruel
2
Nicolas Leulliot
2
Marc Graille
2
Dominique Liger
2
Lionel Trésaugues
2
Joel L Sussman
1
Joël Janin
5
Herman van Tilbeurgh
2
Anne Poupon
2, *
Julie Bernauer 2
Author
Isabelle Krimm 4
Author IdHAL : isabelle-krimm ORCID : https://orcid.org/0000-0002-5981-109X
Sophie Quevillon-Cheruel 2
Author
Nicolas Leulliot 2
Author
Marc Graille 2
Author IdHAL : marc-graille ORCID : https://orcid.org/0000-0002-7853-5852
Dominique Liger 2
Author
Lionel Trésaugues 2
Author
Joel L Sussman 1
Author
Joël Janin 5
Author
Herman van Tilbeurgh 2
Author
Anne Poupon 2
Correspondent author Employer institution : Centre National de la Recherche Scientifique IdHAL : anne-poupon ORCID : https://orcid.org/0000-0003-0617-0935
1
Weizmann Institute of Science [Rehovot, Israël] (234 Herzl Street, Rehovot 7610001 - Israel)
2
IBBMC - Institut de biochimie et biophysique moléculaire et cellulaire (bat. 430 91405 ORSAY CEDEX - France)
- UP11 - Université Paris-Sud - Paris 11 (Bâtiment 300 - 91405 Orsay cedex - France)
- CNRS - Centre National de la Recherche Scientifique : UMR8619 (France)
3
EMBL Outstation Hinxton (European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD - United Kingdom)
- EBI - École de biologie industrielle (49 Avenue des Genottes, 95800 Cergy - France)
4
SA - Sciences Analytiques (bat. 308 43 Bvd du 11 Novembre 1918 69622 VILLEURBANNE CEDEX - France)
- CNRS - Centre National de la Recherche Scientifique : UMR5180 (France)
- UCBL - Université Claude Bernard Lyon 1 (43, boulevard du 11 novembre 1918, 69622 Villeurbanne cedex - France)
- Université de Lyon (92 rue Pasteur - CS 30122, 69361 Lyon Cedex 07 - France)
5
LEBS - Laboratoire d'enzymologie et biochimie structurales (bat. 34 1 Av de la terrasse 91198 GIF SUR YVETTE CEDEX - France)
- CNRS - Centre National de la Recherche Scientifique : UPR9063 (France)
Abstract : Structural genomics aims at the establishment of a universal protein-fold dictionary through systematic structure determination either by NMR or X-ray crystallography. In order to catch up with the explosive amount of protein sequence data, the structural biology laboratories are spurred to increase the speed of the structure-determination process. To achieve this goal, high-throughput robotic approaches are increasingly used in all the steps leading from cloning to data collection and even structure interpretation is becoming more and more automatic. The progress made in these areas has begun to have a significant impact on the more 'classical' structural biology laboratories, dramatically increasing the number of individual experiments. This automation creates the need for efficient data management. Here, a new piece of software, HalX, designed as an 'electronic lab book' that aims at (i) storage and (ii) easy access and use of all experimental data is presented. This should lead to much improved management and tracking of structural genomics experimental data.
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Journal articles
Complete list of metadata
https://hal.inria.fr/inria-00431702
Contributor : Julie Bernauer <>
Submitted on : Thursday, November 12, 2009 - 8:00:53 PM
Last modification on : Saturday, July 3, 2021 - 12:15:46 AM
Contributor : Julie Bernauer <>
Submitted on : Thursday, November 12, 2009 - 8:00:53 PM
Last modification on : Saturday, July 3, 2021 - 12:15:46 AM
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Identifiers
- HAL Id : inria-00431702, version 1
- DOI : 10.1107/S0907444905001290
- PUBMED : 15930618
Collections
CNRS | I2BC | UNIV-LYON1 | UDL | GS-HEALTH-DRUG-SCIENCES
Citation
Jaime Prilusky, Eric Oeuillet, Nathalie Ulryck, Anne Pajon, Julie Bernauer, et al.. HalX: an open-source LIMS (Laboratory Information Management System) for small- to large-scale laboratories.. Acta Crystallographica Section D: Biological Crystallography, International Union of Crystallography, 2005, 61 (Pt 6), pp.671-678. ⟨10.1107/S0907444905001290⟩. ⟨inria-00431702⟩
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