PORGY: Strategy-Driven Interactive Transformation of Graphs

Oana Andrei 1 Maribel Fernandez 2 Hélène Kirchner 3 Guy Melançon 4, 5 Olivier Namet 2 Bruno Pinaud 4, 5, *
* Corresponding author
1 University of Glasgow
2 DCS - Department of Computer Science
3 Inria Bordeaux - Sud-Ouest
4 GRAVITE - Graph Visualization and Interactive Exploration
Université Sciences et Technologies - Bordeaux 1, Inria Bordeaux - Sud-Ouest, École Nationale Supérieure d'Électronique, Informatique et Radiocommunications de Bordeaux (ENSEIRB), CNRS - Centre National de la Recherche Scientifique : UMR
5 LaBRI - Laboratoire Bordelais de Recherche en Informatique
Abstract : This paper investigates the use of graph rewriting systems as a modelling tool, and advocates the embedding of such systems in an interactive environment. One important application domain is the modelling of biochemical systems, where states are represented by port graphs and the dynamics is driven by rules and strategies. A graph rewriting tool's capability to interactively explore the features of the rewriting system provides useful insights into possible behaviours of the model and its properties. We describe PORGY, a visual and interactive tool we have developed to model complex systems using port graphs and port graph rewrite rules guided by strategies, and to navigate in the derivation history. We demonstrate via examples some functionalities provided by PORGY.
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Conference papers
Rachid Echahed. 6th International Workshop on Computing with Terms and Graphs (TERMGRAPH 2011), Apr 2011, Saarbrücken, Germany. 48, pp.54-68, 2011, Electronic Proceedings in Theoretical Computer Science (EPTCS). 〈10.4204/EPTCS.48.7〉
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Submitted on : Friday, February 4, 2011 - 2:43:42 PM
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Oana Andrei, Maribel Fernandez, Hélène Kirchner, Guy Melançon, Olivier Namet, et al.. PORGY: Strategy-Driven Interactive Transformation of Graphs. Rachid Echahed. 6th International Workshop on Computing with Terms and Graphs (TERMGRAPH 2011), Apr 2011, Saarbrücken, Germany. 48, pp.54-68, 2011, Electronic Proceedings in Theoretical Computer Science (EPTCS). 〈10.4204/EPTCS.48.7〉. 〈inria-00563249〉

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