C. Aguilar, C. Montalvo, L. Rodriguez, J. Ceron, C. et al., American oyster (Crassostrea virginica) and sediments as a coastal zone pollution monitor by heavy metals, International Journal of Environmental Science and Technology, vol.22, issue.1, pp.579-586, 2012.
DOI : 10.1007/s13762-012-0078-y

URL : http://dx.doi.org/10.1007/s13762-012-0078-y

H. Ahmed, R. Ushirobira, and D. Efimov, On robustness of phase resetting to cell division under entrainment, Journal of Theoretical Biology, vol.387, pp.206-213, 2015.
DOI : 10.1016/j.jtbi.2015.09.033

URL : https://hal.archives-ouvertes.fr/hal-01211491

H. Ahmed, R. Ushirobira, and D. Efimov, On the robust synchronization of Brockett oscillators, IFAC-PapersOnLine, vol.49, issue.14, pp.142-147, 2016.
DOI : 10.1016/j.ifacol.2016.07.999

URL : https://hal.archives-ouvertes.fr/hal-01380180

H. Ahmed, R. Ushirobira, D. Efimov, and W. Perruquetti, On conditions of robust synchronization for multistable systems, 2015 European Control Conference (ECC), p.2015, 2015.
DOI : 10.1109/ECC.2015.7330543

URL : https://hal.archives-ouvertes.fr/hal-01140326

H. Ahmed, R. Ushirobira, D. Efimov, and W. Perruquetti, Robust Synchronization for Multistable Systems, IEEE Transactions on Automatic Control, vol.61, issue.6, pp.611625-1630, 2016.
DOI : 10.1109/TAC.2015.2476156

URL : https://hal.archives-ouvertes.fr/hal-01185112

H. Ahmed, R. Ushirobira, D. Efimov, D. Tran, and J. Massabuau, Velocity estimation of valve movement in oysters for water quality surveillance, IFAC-PapersOnLine, vol.48, issue.11, pp.48333-338, 2015.
DOI : 10.1016/j.ifacol.2015.09.207

URL : https://hal.archives-ouvertes.fr/hal-01162688

H. Ahmed, R. Ushirobira, D. Efimov, D. Tran, M. Sow et al., Monitoring Biological Rhythms Through the Dynamic Model Identification of an Oyster Population, IEEE Transactions on Systems, Man, and Cybernetics: Systems, p.Systems, 2016.
DOI : 10.1109/TSMC.2016.2523923

URL : https://hal.archives-ouvertes.fr/hal-01220311

H. Ahmed, R. Ushirobira, D. Efimov, D. Tran, M. Sow et al., A Fault Detection Method for Automatic Detection of Spawning in Oysters, IEEE Transactions on Control Systems Technology, vol.24, issue.3, pp.241140-1147, 2016.
DOI : 10.1109/TCST.2015.2472999

URL : https://hal.archives-ouvertes.fr/hal-01185118

S. K. Allen, P. M. Gaffney, E. , and J. W. , Genetic improvement of the eastern oyster for growth and disease resistance in the Northeast, Northeastern Regional Aquaculture Center, 1993.

B. Ananthasubramaniam and H. Herzel, Positive Feedback Promotes Oscillations in Negative Feedback Loops, PLoS ONE, vol.17, issue.8, p.104761, 2014.
DOI : 10.1371/journal.pone.0104761.s002

URL : http://doi.org/10.1371/journal.pone.0104761

A. Andronov, A. Vitt, and A. Khaikin, Theory of oscillators, 1987.

D. Angeli, An Almost Global Notion of Input-to-State Stability, IEEE Transactions on Automatic Control, vol.49, issue.6, pp.866-874, 2004.
DOI : 10.1109/TAC.2004.829594

D. Angeli and D. Efimov, On Input-to-State Stability with respect to decomposable invariant sets, 52nd IEEE Conference on Decision and Control, pp.5897-5902, 2013.
DOI : 10.1109/CDC.2013.6760819

D. Angeli and D. Efimov, Characterizations of input-to-state stability for systems with multiple invariant sets. Automatic Control, IEEE Transactions on, vol.60, issue.12, pp.3242-3256, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01136819

D. Angeli, J. Ferrell, and E. Sontag, Detection of multistability, bifurcations, and hysteresis in a large class of biological positive-feedback systems, Proc. Natl. Acad. Sci. USA, pp.1822-1827, 2004.
DOI : 10.1073/pnas.0308265100

D. Angeli and L. Praly, Stability Robustness in the Presence of Exponentially Unstable Isolated Equilibria, IEEE Transactions on Automatic Control, vol.56, issue.7, pp.1582-1592, 2011.
DOI : 10.1109/TAC.2010.2091170

URL : https://hal.archives-ouvertes.fr/hal-00643454

D. Angeli and E. Sontag, Forward completeness, unboundedness observability, and their Lyapunov characterizations, Systems & Control Letters, vol.38, issue.4-5, pp.4-5209, 1999.
DOI : 10.1016/S0167-6911(99)00055-9

URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.133.6585

D. Angeli and E. Sontag, Multi-stability in monotone input/output systems, Systems & Control Letters, vol.51, issue.3-4, pp.185-202, 2004.
DOI : 10.1016/j.sysconle.2003.08.003

URL : http://arxiv.org/abs/q-bio/0309002

M. Antle, D. Foley, N. Foley, and R. Silver, Gates and Oscillators: A Network Model of the Brain Clock, Journal of Biological Rhythms, vol.18, issue.4, pp.339-350, 2003.
DOI : 10.1177/0748730403253840

N. Cookson, S. Cookson, L. Tsimring, H. , and J. , Cell cycle-dependent variations in protein concentration, Nucleic Acids Research, vol.38, issue.8, pp.2676-2681, 2010.
DOI : 10.1093/nar/gkp1069

P. Danzl and J. Moehlis, Spike timing control of oscillatory neuron models using impulsive and quasi-impulsive charge-balanced inputs, 2008 American Control Conference, pp.171-176, 2008.
DOI : 10.1109/ACC.2008.4586486

A. Das and F. L. Lewis, Distributed adaptive control for synchronization of unknown nonlinear networked systems, Automatica, vol.46, issue.12, pp.462014-2021, 2010.
DOI : 10.1016/j.automatica.2010.08.008

S. Dashkovskiy, D. Efimov, and E. Sontag, Input to state stability and allied system properties. Automation and Remote Control, pp.721579-1614, 2011.
DOI : 10.1134/s0005117911080017

URL : https://hal.archives-ouvertes.fr/hal-00639491

S. Ding, Model-based fault diagnosis techniques, 2008.
DOI : 10.1007/978-1-4471-4799-2

F. G. Doherty, D. S. Cherry, C. Jr, and J. , Valve closure responses of the Asiatic clam Corbicula fluminea exposed to cadmium and zinc, Hydrobiologia, vol.41, issue.2, pp.159-167, 1987.
DOI : 10.1139/f76-247

J. C. Dunlap, J. J. Loros, and P. J. Decoursey, Chronobiology: biological timekeeping, 2004.

D. Efimov, On global Lyapunov characterization of multi-stable nonlinear systems, Proceedings of the 48h IEEE Conference on Decision and Control (CDC) held jointly with 2009 28th Chinese Control Conference, pp.6299-6304, 2009.
DOI : 10.1109/CDC.2009.5399944

D. Efimov, Phase resetting control based on direct phase response curve, Journal of Mathematical Biology, vol.50, issue.4, pp.855-879, 2011.
DOI : 10.1007/s00285-010-0396-y

URL : https://hal.archives-ouvertes.fr/hal-00560990

D. Efimov, Global Lyapunov Analysis of Multistable Nonlinear Systems, SIAM Journal on Control and Optimization, vol.50, issue.5, pp.3132-3154, 2012.
DOI : 10.1137/090767509

URL : https://hal.archives-ouvertes.fr/hal-00745623

D. Efimov, Phase resetting for a network of oscillators via phase response curve approach, Biological Cybernetics, vol.264, issue.2, pp.95-108, 2015.
DOI : 10.1007/s00422-014-0629-z

URL : https://hal.archives-ouvertes.fr/hal-01061988

D. Efimov and A. Fradkov, Yakubovich???s oscillatority of circadian oscillations models, Mathematical Biosciences, vol.216, issue.2, pp.187-191, 2008.
DOI : 10.1016/j.mbs.2008.10.003

D. Efimov and L. Fridman, A hybrid robust non-homogeneous finite-time differentiator. Automatic Control, IEEE Transactions on, vol.56, issue.5, pp.1213-1219, 2011.
DOI : 10.1109/tac.2011.2108590

D. Efimov, W. Perruquetti, and A. Shiriaev, On existence of oscillations in hybrid systems, Nonlinear Analysis: Hybrid Systems, vol.12, issue.5, pp.104-116, 2014.
DOI : 10.1016/j.nahs.2013.11.005

URL : https://hal.archives-ouvertes.fr/hal-00906088

D. Efimov, P. Sacre, and R. Sepulchre, Controlling the phase of an oscillator: A phase response curve approach, Proceedings of the 48h IEEE Conference on Decision and Control (CDC) held jointly with 2009 28th Chinese Control Conference, pp.7692-7697, 2009.
DOI : 10.1109/CDC.2009.5400901

D. Efimov, J. Schiffer, and R. Ortega, Robustness of delayed multistable systems with application to droop-controlled inverter-based microgrids, International Journal of Control, vol.99, issue.5, pp.909-918, 2016.
DOI : 10.1109/JPROC.2010.2080250

URL : https://hal.archives-ouvertes.fr/hal-01211454

E. Egorov and A. Koronovskii, Dynamical control in multistable systems, Technical Physics Letters, vol.30, issue.3, pp.186-189, 2004.
DOI : 10.1134/1.1707162

M. Elowitz and S. Leibler, A synthetic oscillatory network of transcriptional regulators, Nature, vol.403, issue.6767, pp.335-338, 2000.
DOI : 10.1038/35002125

V. Englund and M. Heino, Valve movement of anodonta anatina and unio tumidus (bivalvia, unionidae) in a eutrophic lake, In Annales Zoologici Fennici, vol.31, pp.257-262, 1994.

V. P. Englund and M. P. Heino, Valve movement of the freshwater mussel Anodonta anatina: a reciprocal transplant experiment between lake and river, Hydrobiologia, vol.19, issue.189, pp.49-56, 1996.
DOI : 10.1007/BF00016899

D. Forger and R. Kronauer, Reconciling Mathematical Models of Biological Clocks by Averaging on Approximate Manifolds, SIAM Journal on Applied Mathematics, vol.62, issue.4, pp.1281-1296, 2002.
DOI : 10.1137/S0036139900373587

A. Fradkov, B. Andrievsky, and K. Boykov, Control of the coupled double pendulums system, Mechatronics, vol.15, issue.10, pp.151289-1303, 2005.
DOI : 10.1016/j.mechatronics.2005.03.008

A. L. Fradkov and B. Andrievsky, Synchronization and phase relations in the motion of two-pendulum system, International Journal of Non-Linear Mechanics, vol.42, issue.6, pp.895-901, 2007.
DOI : 10.1016/j.ijnonlinmec.2007.03.016

M. Freeman, Feedback control of intercellular signalling in development, Nature, vol.408, issue.6810, pp.313-319, 2000.
DOI : 10.1038/35042500

G. Galang, C. Bayliss, S. Marshall, and R. O. Sinnott, Real-time detection of water pollution using biosensors and live animal behaviour models, eResearch Australasia: emPower eResearch, 2012.

P. S. Galtsoff, PHYSIOLOGY OF REPRODUCTION OF OSTREA VIRGINICA, The Biological Bulletin, vol.74, issue.3, pp.461-486, 1938.
DOI : 10.2307/1537816

J. Garcia-march, S. Solsona, M. Garciacarrascosa, and A. , Shell gaping behaviour of Pinna nobilis L., 1758: circadian and circalunar rhythms revealed by in situ monitoring, Marine Biology, vol.147, issue.2, pp.689-698, 2008.
DOI : 10.1007/s00227-007-0842-6

V. Gazi and K. M. Passino, Swarm Stability and Optimization, 2011.
DOI : 10.1007/978-3-642-18041-5

A. Gelig, G. Leonov, Y. , and V. , Stability of nonlinear systems with non unique equilibrium, Nauka, Moscow, 1978.

N. Geva-zatorsky, N. Rosenfeld, S. Itzkovitz, R. Milo, A. Sigal et al., Oscillations and variability in the p53 system, Molecular Systems Biology, vol.101, p.33, 2006.
DOI : 10.1038/msb4100068

L. Glass, Y. Nagai, K. Hall, M. Talajic, and S. Nattel, Predicting the entrainment of reentrant cardiac waves using phase resetting curves, Physical Review E, vol.65, issue.2, pp.65-74, 2002.
DOI : 10.1103/PhysRevE.65.021908

A. Goldbeter, Biochemical oscillations and cellular rhythms, 1996.
DOI : 10.1017/CBO9780511608193

A. Goldbeter, Computational approaches to cellular rhythms, Nature, vol.23, issue.6912, pp.238-245, 2002.
DOI : 10.1038/nature01123

J. M. González-miranda, Synchronization and Control of Chaos: An Introduction for Scientists and Engineers, 2004.
DOI : 10.1142/p352

D. Gonze, Modeling the effect of cell division on genetic oscillators, Journal of Theoretical Biology, vol.325, issue.0, pp.22-33, 2013.
DOI : 10.1016/j.jtbi.2013.02.001

D. Gonze and W. Abou-jaoudé, The Goodwin Model: Behind the Hill Function, PLoS ONE, vol.21, issue.8, p.69573, 2013.
DOI : 10.1371/journal.pone.0069573.s005

URL : http://doi.org/10.1371/journal.pone.0069573

W. Govaerts and B. Sautois, Computation of the Phase Response Curve: A Direct Numerical Approach, Neural Computation, vol.18, issue.4, pp.817-847, 2006.
DOI : 10.1162/neco.1995.7.2.307

J. Guckenheimer and P. Holmes, Structurally stable heteroclinic cycles, Math. Proc. Camb, pp.189-192, 1988.
DOI : 10.1126/science.208.4440.173

M. Guevara, L. Glass, and A. Shrier, Phase locking, period-doubling bifurcations, and irregular dynamics in periodically stimulated cardiac cells, Science, vol.214, issue.4527, pp.1350-1353, 1981.
DOI : 10.1126/science.7313693

H. Haberkorn, D. Tran, J. Massabuau, P. Ciret, V. Savar et al., Relationship between valve activity, microalgae concentration in the water and toxin accumulation in the digestive gland of the Pacific oyster Crassostrea gigas exposed to Alexandrium minutum, Marine Pollution Bulletin, vol.62, issue.6, pp.621191-1197, 2011.
DOI : 10.1016/j.marpolbul.2011.03.034

URL : https://hal.archives-ouvertes.fr/hal-00596808

K. D. Ham and M. J. Peterson, ), Environmental Toxicology and Chemistry, vol.15, issue.189, pp.493-498, 1994.
DOI : 10.1002/etc.5620130319

D. Hansel, G. Mato, and C. Meunier, Synchrony in Excitatory Neural Networks, Neural Computation, vol.63, issue.2, pp.307-337, 1995.
DOI : 10.1103/PhysRevLett.70.2391

E. His, Contribution à l'étude biologique de l'huitre dans le bassin d'Arcachon. Activité valvaire de Crassostrea angulata et de Crasssotrea gigas ; application à la reproduction de l'huitre japonaise, 1976.

T. Hu and Z. Lin, Control systems with actuator saturation: analysis and design, 2001.
DOI : 10.1007/978-1-4612-0205-9

R. Isermann, Fault-diagnosis systems, 2006.
DOI : 10.1007/3-540-30368-5

E. Izhikevich, Dynamical Systems in Neuroscience: The Geometry of Excitability and Bursting, 2007.

I. James, Modelling pollution dispersion, the ecosystem and water quality in coastal waters: a review, Environmental Modelling & Software, vol.17, issue.4, pp.363-385, 2002.
DOI : 10.1016/S1364-8152(01)00080-9

S. Jorgensen, A general model for the heavy metal pollution of aquatic ecosystems: Model development. Environmental Software, pp.136-141, 1990.

L. Jou, S. Lin, B. Chen, W. Chen, and C. Liao, Synthesis and measurement of valve activities by an improved online clam-based behavioral monitoring system. Computers and electronics in agriculture, pp.106-118, 2013.

E. Kádár, J. Salánki, R. Jugdaohsingh, J. J. Powell, C. R. Mccrohan et al., Avoidance responses to aluminium in the freshwater bivalve anodonta cygnea, Aquatic Toxicology, issue.3, pp.55137-148, 2001.

T. Kanamaru, Van der Pol oscillator, Scholarpedia, vol.2, issue.1, p.2202, 2007.
DOI : 10.4249/scholarpedia.2202

H. Khalil, Nonlinear Systems, Macmillan. References, vol.88, 1992.

E. Klerman, S. Hilaire, and M. , Review: On Mathematical Modeling of Circadian Rhythms, Performance, and Alertness, Journal of Biological Rhythms, vol.277, issue.2, pp.91-102, 2007.
DOI : 10.1177/0748730407299200

K. J. Kramer, H. A. Jenner, D. Zwart, and D. , The valve movement response of mussels: A tool in biological monitoring, Hydrobiologia, vol.188189, pp.433-443, 1989.

S. Kröger and R. Law, Sensing the sea, Trends in Biotechnology, vol.23, issue.5, pp.250-256, 2005.
DOI : 10.1016/j.tibtech.2005.03.004

Y. Kuramoto, Chemical Oscillations, Waves and Turbulence, 1984.
DOI : 10.1007/978-3-642-69689-3

J. P. Lasalle, Some extensions of Liapunov's second method. Circuit Theory, IRE Transactions on, vol.7, issue.4, pp.520-527, 1960.

F. Lewis, H. Zhang, K. Hengster-movric, and A. Das, Cooperative Control of Multi-Agent Systems. Communications and Control Engineering, 2014.

Z. Li, Z. Duan, G. Chen, and L. Huang, Consensus of multiagent systems and synchronization of complex networks: A unified viewpoint. Circuits and Systems I: Regular Papers, IEEE Transactions on, vol.57, issue.1, pp.213-224, 2010.

L. Ljung, System identification, 1998.
URL : https://hal.archives-ouvertes.fr/hal-00854858

J. Lofberg, YALMIP : a toolbox for modeling and optimization in MATLAB, 2004 IEEE International Conference on Robotics and Automation (IEEE Cat. No.04CH37508), 2004.
DOI : 10.1109/CACSD.2004.1393890

A. Luna-acosta, H. Budzinski, L. Menach, K. Thomas-guyon, H. Bustamante et al., Persistent organic pollutants in a marine bivalve on the marennesoleron bay and the gironde estuary (french atlantic coast)-part 1: Bioaccumulation. Science of The Total Environment, pp.500-510, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01223659

A. Luna-acosta, P. Bustamante, H. Budzinski, V. Huet, and H. Thomas-guyon, Persistent organic pollutants in a marine bivalve on the Marennes???Ol??ron Bay and the Gironde Estuary (French Atlantic Coast)???Part 2: Potential biological effects, Science of The Total Environment, vol.514, pp.511-522, 2015.
DOI : 10.1016/j.scitotenv.2014.10.050

F. Marceau, Contraction of molluscan muscle, Arch. Zool. Exp. Gen, vol.2, pp.295-469, 1909.

M. Mboup, C. Join, and M. Fliess, Numerical differentiation with annihilators in noisy environment, Numerical Algorithms, vol.14, issue.12, pp.439-467, 2009.
DOI : 10.1007/s11075-008-9236-1

URL : https://hal.archives-ouvertes.fr/inria-00319240

I. Mihalcescu, W. Hsing, and S. Leibler, Resilient circadian oscillator revealed in individual cyanobacteria, Nature, vol.269, issue.6995, pp.81-85, 2004.
DOI : 10.1073/pnas.022628299

A. Mimendia, J. M. Gutierrez, L. Leija, P. R. Hernandez, L. Favari et al., A review of the use of the potentiometric electronic tongue in the monitoring of environmental systems, Environmental Modelling & Software, vol.25, issue.9, pp.1023-1030, 2010.
DOI : 10.1016/j.envsoft.2009.12.003

T. Mori, B. Binder, J. , and C. , Circadian gating of cell division in cyanobacteria growing with average doubling times of less than 24 hours., Proc. Natl, 1996.
DOI : 10.1073/pnas.93.19.10183

E. Nagoshi, C. Saini, C. Bauer, T. Laroche, F. Naef et al., Circadian Gene Expression in Individual Fibroblasts, Cell, vol.119, issue.5, pp.693-705, 2004.
DOI : 10.1016/j.cell.2004.11.015

URL : http://doi.org/10.1016/j.cell.2004.11.015

E. Naylor, Chronobiology of marine organisms, 2010.
DOI : 10.1017/CBO9780511803567

O. Nelles, Nonlinear System Identification, 2000.

L. K. Nguyen, Regulation of oscillation dynamics in biochemical systems with dual negative feedback loops, Journal of The Royal Society Interface, vol.96, issue.10, pp.1998-2010, 2012.
DOI : 10.1016/j.bpj.2009.02.064

Z. Nitecki and M. Shub, Filtrations, Decompositions, and Explosions, American Journal of Mathematics, vol.97, issue.4, pp.1029-1047, 1975.
DOI : 10.2307/2373686

C. Oguz, A. Palmisano, T. Laomettachit, L. T. Watson, W. T. Baumann et al., A Stochastic Model Correctly Predicts Changes in Budding Yeast Cell Cycle Dynamics upon Periodic Expression of CLN2, PLoS ONE, vol.191, issue.5, p.96726, 2014.
DOI : 10.1371/journal.pone.0096726.s027

R. Olfati-saber, Flocking for multi-agent dynamic systems: algorithms and theory. Automatic Control, IEEE Transactions on, vol.51, issue.3, pp.401-420, 2006.

G. V. Osipov, J. Kurths, and C. Zhou, Synchronization in Oscillatory Networks, 2007.
DOI : 10.1007/978-3-540-71269-5

T. Palmer, P. Uehling, and J. Pollack, Using oyster tissue toxicity as an indicator of disturbed environments, International Journal of Environmental Science and Technology, vol.16, issue.98, pp.2111-2116, 2015.
DOI : 10.1007/s13762-014-0745-2

URL : http://www.bioline.org.br/pdf?st15197

L. K. Pandey, D. Kumar, A. Yadav, J. Rai, and J. Gaur, Morphological abnormalities in periphytic diatoms as a tool for biomonitoring of heavy metal pollution in a river, Ecological Indicators, vol.36, pp.272-279, 2014.
DOI : 10.1016/j.ecolind.2013.08.002

W. Perruquetti, T. Floquet, and E. Moulay, Finite-time observers: application to secure communication. Automatic Control, IEEE Transactions on, vol.53, issue.1, pp.356-360, 2008.
DOI : 10.1109/tac.2007.914264

URL : https://hal.archives-ouvertes.fr/inria-00176758

A. Pikovsky and J. Kurths, Synchronization: A Universal Concept in Nonlinear Sciences, 2003.
DOI : 10.1017/CBO9780511755743

A. Y. Pogromsky, A partial synchronization theorem, Chaos: An Interdisciplinary Journal of Nonlinear Science, vol.18, issue.3, p.37107, 2008.
DOI : 10.1063/1.2959145

URL : http://repository.tue.nl/650116

A. Rantzer, A dual to Lyapunov's stability theorem, Systems & Control Letters, vol.42, issue.3, pp.161-168, 2001.
DOI : 10.1016/S0167-6911(00)00087-6

A. Robson, R. Wilson, G. De-leaniz, and C. , Mussels flexing their muscles: a new method for quantifying bivalve behaviour, Marine Biology, vol.142, issue.3, pp.1195-1204, 2007.
DOI : 10.1007/s00227-006-0566-z

K. A. Rose, R. I. Mclean, and J. K. Summers, Development and monte carlo analysis of an oyster bioaccumulation model applied to biomonitoring data, Ecological Modelling, vol.45, issue.2, pp.111-132, 1989.
DOI : 10.1016/0304-3800(89)90087-2

F. G. Schmitt, M. De-rosa, G. Durrieu, M. Sow, P. Ciret et al., STATISTICAL STUDY OF BIVALVE HIGH FREQUENCY MICROCLOSING BEHAVIOR: SCALING PROPERTIES AND SHOT NOISE ANALYSIS, International Journal of Bifurcation and Chaos, vol.21, issue.12, pp.3565-3576, 2011.
DOI : 10.1142/S0218127411030738

URL : https://hal.archives-ouvertes.fr/hal-00906320

J. S. Shamma, Cooperative Control of Distributed Multi-Agent Systems, 2008.
DOI : 10.1002/9780470724200

S. E. Shumway and T. L. Cucci, The effects of the toxic dinoflagellate Protogonyaulax tamarensis on the feeding and behaviour of bivalve molluscs, Aquatic Toxicology, vol.10, issue.1, pp.9-27, 1987.
DOI : 10.1016/0166-445X(87)90024-5

R. Smeal, G. Ermentrout, and J. White, Phase-response curves and synchronized neural networks, Philosophical Transactions of the Royal Society B: Biological Sciences, vol.67, issue.1, pp.2407-2422, 2010.
DOI : 10.1126/science.663646

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2894948

P. Smolen, D. Baxter, and J. Byrne, A Reduced Model Clarifies the Role of Feedback Loops and Time Delays in the Drosophila Circadian Oscillator, Biophysical Journal, vol.83, issue.5, pp.2349-2359, 2002.
DOI : 10.1016/S0006-3495(02)75249-1

E. Sontag and Y. Wang, Lyapunov Characterizations of Input to Output Stability, SIAM Journal on Control and Optimization, vol.39, issue.1, pp.226-249, 2001.
DOI : 10.1137/S0363012999350213

URL : http://arxiv.org/abs/math/9902024

M. Sow, G. Durrieu, L. Briollais, P. Ciret, and J. Massabuau, Water quality assessment by means of HFNI valvometry and high-frequency data modeling, Environmental Monitoring and Assessment, vol.26, issue.7, pp.1-4155, 2011.
DOI : 10.1007/s10661-010-1866-9

URL : https://hal.archives-ouvertes.fr/hal-00905395

G. Stan and R. Sepulchre, Analysis of Interconnected Oscillators by Dissipativity Theory, IEEE Transactions on Automatic Control, vol.52, issue.2, pp.256-270, 2007.
DOI : 10.1109/TAC.2006.890471

URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.155.704

S. H. Strogatz, Sync: How Order Emerges from Chaos in the Universe, Nature, and Daily Life, 2004.

P. Tass, Phase Resetting in Medicine and Biology. Stochastic Modeling and Data Analysis, 1999.
DOI : 10.1007/978-3-540-38161-7

T. Telfer, H. Atkin, and R. Corner, Review of environmental impact assessment and monitoring in aquaculture in europe and north america, Environmental impact assessment and monitoring in aquaculture, Fish Aquac Tech Pap No. 527, pp.285-394, 2009.

S. Tlili, L. Minguez, L. Giamberini, A. Geffard, H. Boussetta et al., Assessment of the health status of Donax trunculus from the Gulf of Tunis using integrative biomarker indices, Ecological Indicators, vol.32, pp.285-293, 2013.
DOI : 10.1016/j.ecolind.2013.04.003

URL : https://hal.archives-ouvertes.fr/hal-01119671

D. S. Tourigny, Geometric phase shifts in biological oscillators, Journal of Theoretical Biology, vol.355, issue.0, pp.239-242, 2014.
DOI : 10.1016/j.jtbi.2014.04.017

D. Tran, P. Ciret, A. Ciutat, G. Durrieu, and J. Massabuau, Estimation of potential and limits of bivalve closure response to detect contaminants: Application to cadmium, Environmental Toxicology and Chemistry, vol.57, issue.189, pp.914-920, 2003.
DOI : 10.1002/etc.5620220432

D. Tran, A. Nadau, G. Durrieu, P. Ciret, J. P. Parisot et al., Field Chronobiology of a Molluscan Bivalve: How the Moon and Sun Cycles Interact to Drive Oyster Activity Rhythms, Chronobiology International, vol.132, issue.4, pp.307-317, 2011.
DOI : 10.3109/07420529808998684

R. Ushirobira, W. Perruquetti, M. Mboup, and M. Fliess, Algebraic parameter estimation of a multi-sinusoidal waveform signal from noisy data, Control Conference (ECC), 2013 European, pp.1902-1907, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00819048

E. Walter and L. Pronzato, Identification of parametric models, Communications and Control Engineering, 1997.
URL : https://hal.archives-ouvertes.fr/hal-00252148

A. Winfree, The Geometry of Biological Time, 1980.
DOI : 10.1007/978-3-662-22492-2

V. Yakubovich and V. Starzhinskii, Linear differential equations with periodic coefficients, 1975.

G. Zhao, Phase organization of circadian oscillators in extended gate and oscillator models, Journal of Theoretical Biology, vol.264, issue.2, pp.367-376, 2010.
DOI : 10.1016/j.jtbi.2010.02.003

J. Zhao, D. Hill, and T. Liu, Global bounded synchronization of general dynamical networks with nonidentical nodes. Automatic Control, IEEE Transactions on, vol.57, issue.10, pp.2656-2662, 2012.

Z. T. Zhusubaliyev, A. Medvedev, and M. M. Silva, Nonlinear dynamics in closed-loop anesthesia: Pharmacokinetic/pharmacodynamic model under PID-feedback, 2014 American Control Conference, pp.5496-5501, 2014.
DOI : 10.1109/ACC.2014.6858674

Z. T. Zhusubaliyev, A. Medvedev, and M. M. Silva, Bifurcation analysis of PID-controlled neuromuscular blockade in closed-loop anesthesia, Journal of Process Control, vol.25, pp.152-163, 2015.
DOI : 10.1016/j.jprocont.2014.10.006

A. Zolghadri, D. Henry, J. Cieslak, D. Efimov, and P. Goupil, Fault Diagnosis and Fault-Tolerant Control and Guidance for Aerospace Vehicles. Springer. 1. The system admits an ISS Lyapunov function; 2. The system enjoys the AG property; 3. The system admits a practical ISS Lyapunov function; 4. The system enjoys the pAG property; 5. The system enjoys the LIM property and the pGS. A system in (C.1), for which this list of equivalent properties is satisfied, 2014.
URL : https://hal.archives-ouvertes.fr/hal-00869253