Barycentric Subspace Analysis: a new Symmetric Group-wise Paradigm for Cardiac Motion Tracking, MIC- CAI 2016 -the 19th International Conference on Medical Image Computing and Computer Assisted Intervention ,
Combination of Polyaffine Transformations and Supervised Learning for the Automatic Diagnosis of LV Infarct, Statistical Atlases and Computational Modeling of the Heart, 2015. ,
DOI : 10.1007/11752790_2
Highly reduced model of the cardiac function for fast simulation, 2016 IEEE 12th Image, Video, and Multidimensional Signal Processing Workshop (IVMSP), pp.2016-2028 ,
DOI : 10.1109/IVMSPW.2016.7528214
SVF-Net: Learning Deformable Image Registration Using Shape Matching, MICCAI 2017 -the 20th International Conference on Medical Image Computing and Computer Assisted Intervention. Chapter ,
DOI : 10.1007/978-3-319-46976-8_6
Propagation of Myocardial Fibre Architecture Uncertainty on Electromechanical Model Parameter Estimation: A Case Study, Functional Imaging and Modeling of the Heart, 2015. ,
DOI : 10.1007/978-3-319-20309-6_51
Prediction of Post-Ablation Outcome in Atrial Fibrillation Using Shape Parameterization and Partial Least Squares Regression, Functional Imaging and Modeling of the Heart, 2017. ,
DOI : 10.1016/j.echo.2011.01.014
URL : https://hal.archives-ouvertes.fr/hal-01574831
Rigid body registration. Statistical parametric mapping: The analysis of functional brain images, pp.49-62, 2007. ,
DOI : 10.1016/b978-012372560-8/50004-8
Diffeomorphic registration using geodesic shooting and Gauss???Newton optimisation, NeuroImage, vol.55, issue.3, pp.954-967, 2011. ,
DOI : 10.1016/j.neuroimage.2010.12.049
Symmetric diffeomorphic modeling of longitudinal structural MRI, Frontiers in Neuroscience, vol.6, pp.197-2013, 2013. ,
DOI : 10.3389/fnins.2012.00197
Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain, Medical image analysis, vol.12, issue.35, pp.26-41, 2008. ,
A combined deep-learning and deformable-model approach to fully automatic segmentation of the left ventricle in cardiac MRI, Medical Image Analysis, vol.30, pp.108-119, 2016. ,
DOI : 10.1016/j.media.2016.01.005
Towards virtual physiological human: Multilevel modelling and simulation of the human anatomy and physiology. Virtual Physiological Human: White paper, pp.213-220, 2006. ,
Non-rigid groupwise registration using B-spline deformation model. Open source and open data for MICCAI, pp.105-121, 2007. ,
Multiclass Brain–Computer Interface Classification by Riemannian Geometry, IEEE Transactions on Biomedical Engineering, vol.59, issue.4, pp.920-928, 2012. ,
DOI : 10.1109/TBME.2011.2172210
Performance of optical flow techniques, International journal of computer vision, vol.12, issue.1, pp.43-77, 1994. ,
Computing large deformation metric mappings via geodesic flows of diffeomorphisms, International journal of computer vision, vol.61, issue.86, pp.139-157, 2005. ,
Threeand four-dimensional cardiovascular ultrasound imaging: a new era for echocardiography, Mayo Clinic Proceedings, pp.221-240, 1993. ,
Body-Mass Index and Mortality among 1.46 Million White Adults, New England Journal of Medicine, vol.363, issue.23, pp.2211-2219, 2010. ,
DOI : 10.1056/NEJMoa1000367
Constrained optimization and lagrange multiplier methods Academic press, 2014. ,
Method for registration of 3-D shapes, Robotics-DL tentative, pp.586-606, 1992. ,
A Biomechanical Model of Muscle Contraction, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.1159-1161, 2001. ,
DOI : 10.1007/3-540-45468-3_143
Consistent groupwise non-rigid registration for atlas construction, Biomedical Imaging: Nano to Macro IEEE International Symposium on, pp.908-911, 2004. ,
Hybrid Spline-Based Multimodal Registration Using Local Measures for Joint Entropy and Mutual Information, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.607-615, 2009. ,
DOI : 10.1109/42.816072
Investigating Cardiac Function Using Motion and Deformation Analysis in the Setting of Coronary Artery Disease, Circulation, vol.116, issue.21, p.76, 2007. ,
DOI : 10.1161/CIRCULATIONAHA.106.684357
Multi-ethnic study of atherosclerosis: objectives Bibliography and design, American journal of epidemiology, vol.156, issue.144, pp.871-881, 2002. ,
Myocardial deformation recovery from cine MRI using a nearly incompressible biventricular model, Medical Image Analysis, vol.12, issue.1, pp.69-85, 2008. ,
DOI : 10.1016/j.media.2007.10.009
Clinical cardiac mri, 2005. ,
Medical physiology, 2e updated edition: with student consult online access, p.2012, 2012. ,
Contributions to 3D Diffeomorphic Atlas Estimation: Application to Brain Images, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.667-674, 2007. ,
DOI : 10.1007/978-3-540-75757-3_81
Fast approximate energy minimization via graph cuts, IEEE Transactions on Pattern Analysis and Machine Intelligence, vol.23, issue.11, pp.1222-1239, 2001. ,
DOI : 10.1109/34.969114
URL : http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.112.6806&rep=rep1&type=pdf
European cardiovascular magnetic resonance (EuroCMR) registry ??? multi national results from 57 centers in 15 countries, Journal of Cardiovascular Magnetic Resonance, vol.15, issue.1, pp.9-2013, 2013. ,
DOI : 10.1016/j.jcmg.2011.11.021
Statistical Shape Modeling for Cavopulmonary Assist Device Development: Variability of Vascular Graft Geometry and Implications for Hemodynamics, Journal of Medical Devices, vol.11, issue.2, pp.21011-2017 ,
Modeling of Congenital Hearts Alliance Collaborative Groupet al. How successful is successful? Aortic arch shape after successful aortic coarctation repair correlates with left ventricular function, The Journal of thoracic and cardiovascular surgery, vol.153, issue.2, pp.418-427 ,
Iconic feature based nonrigid registration: the PASHA algorithm, Computer Vision and Image Understanding, vol.89, issue.2-3, pp.272-298, 2003. ,
DOI : 10.1016/S1077-3142(03)00002-X
The Segmentation of the Left Ventricle of the Heart From Ultrasound Data Using Deep Learning Architectures and Derivative-Based Search Methods, IEEE Transactions on Image Processing, vol.21, issue.3, pp.968-982, 2012. ,
DOI : 10.1109/TIP.2011.2169273
How has body image changed? A cross-sectional investigation of college women and men from, Journal of consulting and clinical psychology, vol.72, issue.6, p.1081, 1983. ,
Analysis of 3-D Myocardial Motion in Tagged MR Images Using Nonrigid Image Registration, IEEE Transactions on Medical Imaging, vol.23, issue.10, pp.1245-1250, 2004. ,
DOI : 10.1109/TMI.2004.834607
Object modelling by registration of multiple range images, Image and Vision Computing, vol.10, issue.3, pp.145-155, 1992. ,
DOI : 10.1016/0262-8856(92)90066-C
Impact of left ventricular trabeculations and papillary muscles on measures of cavity volume and ejection fraction, Journal of Cardiovascular Magnetic Resonance, vol.13, issue.S1, p.36, 2011. ,
A new point matching algorithm for non-rigid registration, Computer Vision and Image Understanding, vol.89, issue.2, pp.114-141, 2003. ,
net: learning dense volumetric segmentation from sparse annotation, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.424-432, 2016. ,
Hybrid Feature-Based Diffeomorphic Registration for Tumor Tracking in 2-D Liver Ultrasound Images, IEEE Transactions on Medical Imaging, vol.32, issue.9, pp.1647-1656, 2013. ,
DOI : 10.1109/TMI.2013.2262055
Two-dimensional spatial and temporal displacement and deformation field fitting from cardiac magnetic resonance tagging, Medical Image Analysis, vol.4, issue.3, pp.253-268, 2000. ,
DOI : 10.1016/S1361-8415(00)00018-9
Anatomical evalua.on of colin 27 against a database of labeled brain scans, 2016. ,
A longitudinal EEG study of mild senile dementia of Alzheimer type: changes at 1 year and at 2.5 years, Electroencephalography and clinical neurophysiology, vol.61, issue.2, pp.101-112, 1985. ,
Automatic 3-D model-based neuroanatomical segmentation, Human Brain Mapping, vol.16, issue.2, pp.190-208, 1995. ,
DOI : 10.3109/14639239109012126
An efficient locally affine framework for the smooth registration of anatomical structures, Medical Image Analysis, vol.12, issue.4, pp.427-441, 2008. ,
DOI : 10.1016/j.media.2008.01.002
URL : https://hal.archives-ouvertes.fr/inria-00616074
Adaptive Mesh Generation of MRI Images for 3D Reconstruction of Human Trunk, International Conference Image Analysis and Recognition, pp.1040-1051, 2007. ,
DOI : 10.1007/978-3-540-74260-9_92
Segmentation of 4D cardiac MRI: Automated method based on spatio-temporal watershed cuts, Image and Vision Computing, vol.28, issue.8, pp.1229-1243, 2010. ,
DOI : 10.1016/j.imavis.2010.01.001
URL : https://hal.archives-ouvertes.fr/hal-00622482
Influence of ultrasound speckle tracking strategies for motion and strain estimation, Medical image analysis, vol.32, pp.184-200, 2016. ,
A physics-based coordinate transformation for 3-D image matching, IEEE transactions on medical imaging, 1997. ,
Temporal diffeomorphic free-form deformation for strain quantification in 3D-US images. Medical Image Computing and Computer-Assisted Intervention?MICCAI, pp.1-8, 2010. ,
Temporal Diffeomorphic Free Form Deformation (TDFFD) Applied to Motion and Deformation Quantification of Tagged MRI Sequences, International Workshop on Statistical Atlases and Computational Models of the Heart, pp.68-77, 2011. ,
DOI : 10.1112/plms/s3-13.1.743
Temporal diffeomorphic free-form deformation: Application to motion and strain estimation from 3D echocardiography, Medical Image Analysis, vol.16, issue.2, pp.427-450 ,
DOI : 10.1016/j.media.2011.10.006
3D Strain Assessment in Ultrasound (Straus): A Synthetic Comparison of Five Tracking Methodologies, IEEE Transactions on Medical Imaging, vol.32, issue.9, pp.1632-1646 ,
DOI : 10.1109/TMI.2013.2261823
Segmentation algorithms of subcortical brain structures on MRI: a review, Journal of Neuroimage, pp.200-212, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-01182305
An image correlation procedure for digitally reconstructed radiographs and electronic portal images, International Journal of Radiation Oncology* Biology* Physics, vol.33, issue.5, pp.1053-1060, 1995. ,
Minimizing radiation dose for pediatric body applications of single-detector helical CT: strategies at a large children's hospital, American Journal of Roentgenology, vol.176, issue.2, pp.303-306, 2001. ,
Registration, atlas estimation and variability analysis of white matter fiber bundles modeled as currents, NeuroImage, vol.55, issue.3, pp.1073-1090, 2011. ,
DOI : 10.1016/j.neuroimage.2010.11.056
Morphometry of anatomical shape complexes with dense deformations and sparse parameters, NeuroImage, vol.101, pp.41-45, 2014. ,
DOI : 10.1016/j.neuroimage.2014.06.043
Automatic Model-Based Segmentation of the Heart in CT Images, IEEE Transactions on Medical Imaging, vol.27, issue.9, pp.1189-1201, 2008. ,
DOI : 10.1109/TMI.2008.918330
Classification of the cardiomyopathies: a position statement from the european society of cardiology working group on myocardial and pericardial diseases, European Heart Journal, vol.29, issue.2, p.9, 2007. ,
DOI : 10.1093/eurheartj/ehm342
Cardiomyopathy Classification: Ongoing Debate in the Genomics Era, Biochemistry Research International, p.2012, 2012. ,
Brain Development Cooperative Groupet al. The NIH MRI study of normal brain development, Neuroimage, vol.30, issue.1, pp.184-202, 2006. ,
Automatic registration system for use with position tracking and imaging system for use in medical applications, US Patent, vol.5873, p.822, 1999. ,
Principal Geodesic Analysis for the Study of Nonlinear Statistics of Shape, IEEE Transactions on Medical Imaging, vol.23, issue.8, 2004. ,
DOI : 10.1109/TMI.2004.831793
The Cardiac Atlas Projectâ??an imaging database for computational modeling and statistical atlases of the heart, Bioinformatics, vol.27, issue.144, pp.2288-2295, 2011. ,
Automatic construction of multiple-object three-dimensional statistical shape models: Application to cardiac modeling, IEEE transactions on medical imaging, vol.21, issue.9, pp.1151-1166, 2002. ,
Guidelines and protocols for cardiovascular magnetic resonance in children and adults with congenital heart disease: SCMR expert consensus group on congenital heart disease, Journal of Cardiovascular Magnetic Resonance, vol.15, issue.1, pp.51-2013, 2013. ,
DOI : 10.1081/JCMR-120022267
Deep Neural Networks for Fast Segmentation of 3D Medical Images, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.158-165, 2016. ,
DOI : 10.1109/ICCV.2015.123
Fast Determination of Regional Myocardial Strain Fields From Tagged Cardiac Images Using Harmonic Phase MRI, Circulation, vol.101, issue.9, pp.981-988, 2000. ,
DOI : 10.1161/01.CIR.101.9.981
Progressive left ventricular dysfunction and remodeling after myocardial infarction. Potential mechanisms and early predictors, Circulation, vol.87, issue.3, pp.755-763, 1993. ,
DOI : 10.1161/01.CIR.87.3.755
A Separability Marker based on high-dimensional statistics for classification confidence assessment, 2016 IEEE International Conference on Systems, Man, and Cybernetics (SMC), 2016. ,
DOI : 10.1109/SMC.2016.7844725
URL : https://hal.archives-ouvertes.fr/hal-01407759
An artificial agent for anatomical landmark detection in medical images, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.229-237, 2016. ,
Brain development during childhood and adolescence: a longitudinal MRI study, Nature neuroscience, vol.2, issue.10, pp.861-863, 1999. ,
On robust partial least squares (PLS) methods, Journal of Chemometrics, vol.12, issue.6, pp.365-378, 1998. ,
A comparative evaluation of interest point detectors and local descriptors for visual SLAM, Machine Vision and Applications, pp.905-920, 2010. ,
DOI : 10.1007/s00138-009-0195-x
A case of arrhythmogenic right ventricular cardiomyopathy, Canadian Journal of Cardiology, vol.24, issue.1, pp.61-62, 2008. ,
DOI : 10.1016/S0828-282X(08)70551-8
Nonrigid registration of shapes via diffeomorphic point matching, Biomedical Imaging: Nano to Macro IEEE International Symposium on, pp.924-927, 2004. ,
Longitudinal analysis of image time series with diffeomorphic deformations: a computational framework based on stationary velocity fields, Frontiers in Neuroscience, vol.10, issue.126, p.28, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-01329989
PAST- PAlaeontological STatistics, ver. 1.89, pp.1-31, 2009. ,
2075 Papillary muscles and trabeculations significantly impact ventricular volume, ejection fraction, and regurgitation assessment by cardiovascular magnetic resonance in patients with hypertrophic cardiomyopathy, Journal of Cardiovascular Magnetic Resonance, vol.10, issue.Suppl 1, p.344, 2008. ,
DOI : 10.1186/1532-429X-10-S1-A344
Polyaffine parametrization of image registration based on geodesic flows, Mathematical Methods in Biomedical Image Analysis (MMBIA), 2012 IEEE Workshop on, pp.289-295, 2012. ,
Comprehensive assessment of the global and regional vascular responses to food ingestion in humans using novel rapid MRI, American Journal of Physiology-Regulatory, Integrative and Comparative Physiology, vol.310, issue.6, pp.541-545, 2016. ,
Daniel Rueckert and Alexander Hammers Automatic anatomical brain MRI segmentation combining label propagation and decision fusion, NeuroImage, vol.33, issue.66, pp.115-126, 2006. ,
Deformable image registration by combining uncertainty estimates from supervoxel belief propagation, Medical image analysis, vol.27, pp.57-71, 2016. ,
Standardized myocardial segmentation and nomenclature for tomographic imaging of the heart: a statement for healthcare professionals from the Cardiac Imaging Committee of the Council on Clinical Cardiology of the American Heart Association, Journal of Nuclear Cardiology, vol.9, issue.2, pp.240-245, 2002. ,
Spatio-temporal tracking of myocardial deformations with a 4-D B-spline model from tagged MRI, IEEE Transactions on Medical Imaging, vol.18, issue.10, pp.957-972, 1999. ,
DOI : 10.1109/42.811299
Integration from proteins to organs: the Physiome Project, Nature reviews Molecular cell biology, vol.4, issue.3, pp.237-243, 2003. ,
A vision and strategy for the virtual physiological human in 2010 and beyond, Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, vol.366, issue.1920, pp.2595-2614, 1920. ,
DOI : 10.1098/rsta.2010.0048
Robust initial detection of landmarks in film-screen mammograms using multiple FFDM atlases, IEEE transactions on medical imaging, vol.28, issue.11, pp.1815-1824, 2009. ,
Multi-atlas segmentation of biomedical images: a survey, Medical image analysis, vol.24, issue.60, pp.205-219, 2015. ,
A GPGPU approach for accelerating 2-D/3-D rigid registration of medical images, International Symposium on Parallel and Distributed Processing and Applications, pp.939-950, 2006. ,
Patient-Specific Modeling and Quantification of the Aortic and Mitral Valves From 4-D Cardiac CT and TEE, IEEE Transactions on Medical Imaging, vol.29, issue.9, pp.1636-1651, 2010. ,
DOI : 10.1109/TMI.2010.2048756
Multi-Atlas-Based Segmentation With Local Decision Fusion—Application to Cardiac and Aortic Segmentation in CT Scans, IEEE Transactions on Medical Imaging, vol.28, issue.7, pp.1000-1010, 2009. ,
DOI : 10.1109/TMI.2008.2011480
STACOM-SLAWT Challenge: Left Atrial Wall Segmentation and Thickness Measurement Using Region Growing and Marker-Controlled Geodesic Active Contour, Statistical Atlases and Computational Modeling of the Heart, p.2016, 2016. ,
Spatio-temporal pharmacokinetic model based registration of 4D PET neuroimaging data, NeuroImage, vol.84, pp.225-235, 2014. ,
DOI : 10.1016/j.neuroimage.2013.08.031
Automatic Segmentation of the Left Ventricle in Cardiac MR and CT Images, International Journal of Computer Vision, vol.16, issue.4, pp.151-163, 2006. ,
DOI : 10.1007/s11263-006-7936-3
Unbiased diffeomorphic atlas construction for computational anatomy, NeuroImage, vol.23, p.79, 2004. ,
DOI : 10.1016/j.neuroimage.2004.07.068
ECG-correlated image reconstruction from subsecond multi-slice spiral CT scans of the heart, Medical Physics, vol.339, issue.8, pp.1881-1902, 2000. ,
DOI : 10.1056/NEJM199812313392702
Rationale and design for the defibrillators to reduce risk by magnetic resonance imaging evaluation (DETERMINE) trial, Journal of cardiovascular electrophysiology, vol.20, issue.144, pp.982-987, 2009. ,
Cardiovascular Effects of Aging Interrelationships of Aortic, Left Ventricular, and Left Atrial Function, Herz, vol.26, issue.2, pp.129-139, 2001. ,
DOI : 10.1007/s00059-001-2259-1
A New Automated Technique for Left- and Right-Ventricular Segmentation in Magnetic Resonance Imaging, 2006 International Conference of the IEEE Engineering in Medicine and Biology Society, pp.3074-3077, 2006. ,
DOI : 10.1109/IEMBS.2006.260405
Recommendations for cardiovascular magnetic resonance in adults with congenital heart disease from the respective working groups of the European Society of Cardiology, European heart journal, p.586, 2010. ,
Adam: A Method for Stochastic Optimization, 2014. ,
Mindboggle: Automated brain labeling with multiple atlases, BMC Medical Imaging, vol.20, issue.1, pp.7-61, 2005. ,
DOI : 10.1109/42.906424
Evaluation of Optimization Methods for Nonrigid Medical Image Registration Using Mutual Information and B-Splines, IEEE Transactions on Image Processing, vol.16, issue.12, pp.2879-2890, 2007. ,
DOI : 10.1109/TIP.2007.909412
Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration, NeuroImage, vol.46, issue.3, 2009. ,
DOI : 10.1016/j.neuroimage.2008.12.037
URL : https://hal.archives-ouvertes.fr/inserm-00360790
Adaptive Stochastic Gradient Descent Optimisation for Image Registration, International Journal of Computer Vision, vol.21, issue.11, p.227, 2009. ,
DOI : 10.1016/S1361-8415(01)80026-8
Left Ventricular Remodeling in Heart Failure. Current Concepts in Clinical Significance and Assessment, JACC: Cardiovascular Imaging, vol.104, p.76, 2011. ,
Standardized cardiovascular magnetic resonance (CMR) protocols 2013 update, Journal of Cardiovascular Magnetic Resonance, vol.15, issue.1, pp.91-2013, 2013. ,
ImageNet classification with deep convolutional neural networks, Advances in neural information processing systems, pp.1097-1105, 2012. ,
DOI : 10.1162/neco.2009.10-08-881
Image formation by induced local interactions: examples employing nuclear magnetic resonance, 1973. ,
Longitudinal Development of Human Brain Wiring Continues from Childhood into Adulthood, Journal of Neuroscience, vol.31, issue.30, pp.10937-10947, 2011. ,
DOI : 10.1523/JNEUROSCI.5302-10.2011
Spatio-temporal nonrigid registration for ultrasound cardiac motion estimation, IEEE transactions on medical imaging, vol.24, issue.9, pp.1113-1126, 2005. ,
Random forest classification for automatic delineation of myocardium in real-time 3D echocardiography, International Conference on Functional Imaging and Modeling of the Heart, pp.447-456, 2009. ,
Fast normalized cross-correlation, Vision interface, pp.120-123, 1995. ,
In-line Automated Tracking for Ventricular Function With Magnetic Resonance Imaging, JACC: Cardiovascular Imaging, vol.3, issue.8, pp.860-866, 2010. ,
DOI : 10.1016/j.jcmg.2010.04.013
Principles of magnetic resonance imaging: a signal processing perspective, 1999. ,
DOI : 10.1109/9780470545652
Fully convolutional networks for semantic segmentation, 2015 IEEE Conference on Computer Vision and Pattern Recognition (CVPR), p.2015, 2015. ,
DOI : 10.1109/CVPR.2015.7298965
Xavier Pennecet al. 4D registration of serial brain's MR images: a robust measure of changes applied to Alzheimer's disease, Spatio Temporal Image Analysis Workshop (STIA), MICCAI. Citeseer, p.2010, 2010. ,
LCC-Demons: A robust and accurate symmetric diffeomorphic registration algorithm, NeuroImage, vol.81, issue.46, pp.470-483, 2013. ,
DOI : 10.1016/j.neuroimage.2013.04.114
Geodesics, Parallel Transport & One-Parameter Subgroups for Diffeomorphic Image Registration, International Journal of Computer Vision, vol.65, issue.8, pp.111-127, 2013. ,
DOI : 10.1007/s10851-008-0074-5
URL : https://hal.archives-ouvertes.fr/hal-00813835
Atlas-based segmentation and tracking of 3D cardiac MR images using non-rigid registration, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.642-650, 2002. ,
Segmentation of 4D cardiac MR images using a probabilistic atlas and the EM algorithm, Medical Image Analysis, vol.8, issue.3, pp.255-265, 2004. ,
Multi-modal diffeomorphic demons registration based on point-wise mutual information, 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, pp.372-375, 2010. ,
DOI : 10.1109/ISBI.2010.5490333
Multimodality image registration by maximization of mutual information, IEEE Transactions on Medical Imaging, vol.16, issue.2, pp.187-198, 1997. ,
DOI : 10.1109/42.563664
A review of cardiac image registration methods, IEEE Transactions on Medical Imaging, vol.21, issue.9, pp.1011-1021, 2002. ,
DOI : 10.1109/TMI.2002.804441
Multi-planar image formation using NMR spin echoes, Journal of Physics C: Solid State Physics, vol.10, issue.3, p.55, 1977. ,
DOI : 10.1088/0022-3719/10/3/004
iLogDemons: A Demons-Based Registration Algorithm for??Tracking Incompressible Elastic Biological Tissues, International Journal of Computer Vision, vol.28, issue.12, pp.92-111, 2011. ,
DOI : 10.1109/TMI.2009.2025654
Personalization of a cardiac electromechanical model using reduced order unscented Kalman filtering from regional volumes, Medical Image Analysis, vol.17, issue.7, pp.816-829, 2013. ,
DOI : 10.1016/j.media.2013.04.012
URL : https://hal.archives-ouvertes.fr/hal-00819806
Right ventricular dysplasia: a report of 24 adult cases, Circulation, vol.65, issue.10, pp.384-398, 1982. ,
Layered Spatio-temporal Forests for Left Ventricle Segmentation from 4D Cardiac MRI Data, International Workshop on Statistical Atlases and Computational Models of the Heart, pp.109-119, 2011. ,
DOI : 10.1007/978-3-642-22092-0_3
URL : https://hal.archives-ouvertes.fr/hal-00646674
Performance evaluation of a multi-slice CT system, Medical physics, vol.26, issue.11, pp.2223-2230, 1999. ,
Deformable models in medical image analysis: a survey, Medical Image Analysis, vol.1, issue.2, pp.91-108, 1996. ,
DOI : 10.1016/S1361-8415(96)80007-7
Left ventricular remodeling after myocardial infarction: a corollary to infarct expansion, Circulation, vol.74, issue.4, pp.693-702, 1986. ,
DOI : 10.1161/01.CIR.74.4.693
Maxime Sermesant and Xavier Pennec. An incompressible log-domain demons algorithm for tracking heart tissue, International Workshop on Statistical Atlases and Computational Models of the Heart, pp.55-67, 2011. ,
A Near-Incompressible Poly-affine Motion Model for Cardiac Function Analysis, International Workshop on Statistical Atlases and Computational Models of the Heart, pp.288-297, 2012. ,
DOI : 10.1007/978-3-642-36961-2_33
URL : https://hal.archives-ouvertes.fr/hal-00813852
Reduced-order statistical models of cardiac growth, motion and blood flow: application to the tetralogy of Fallot heart, 2013. ,
URL : https://hal.archives-ouvertes.fr/tel-00942556
Statistical Shape Analysis of Surfaces in Medical Images Applied to the Tetralogy of Fallot Heart, Modeling in Computational Biology and Biomedicine, pp.165-191, 2013. ,
DOI : 10.1007/978-3-642-31208-3_5
URL : https://hal.archives-ouvertes.fr/hal-00813850
Regional Analysis of Left Ventricle Function Using a Cardiac-Specific Polyaffine Motion Model, International Conference on Functional Imaging and Modeling of the Heart, pp.483-490, 2013. ,
DOI : 10.1007/978-3-642-38899-6_57
URL : https://hal.archives-ouvertes.fr/hal-00840042
Spatio-Temporal Tensor Decomposition of a Polyaffine Motion Model for a Better Analysis of Pathological Left Ventricular Dynamics, IEEE Transactions on Medical Imaging, vol.34, issue.7, pp.1562-1675, 2015. ,
DOI : 10.1109/TMI.2015.2405579
URL : https://hal.archives-ouvertes.fr/hal-01205342
Atlas-based analysis of cardiac shape and function: correction of regional shape bias due to imaging protocol for population studies, Journal of Cardiovascular Magnetic Resonance, vol.15, issue.1, pp.80-2013 ,
DOI : 10.1186/1532-429X-15-80
Cardiac remodelling: concentric versus eccentric hypertrophy in strength and endurance athletes, Netherlands Heart Journal, vol.16, issue.4, pp.129-133, 2008. ,
DOI : 10.1007/BF03086131
On the metrics and Euler-Lagrange equations of computational anatomy, Annual review of biomedical engineering, vol.4, issue.1, pp.375-405, 2002. ,
Geodesic shooting for computational anatomy, Journal of mathematical imaging and vision, vol.24, issue.2, pp.209-228, 2006. ,
Reducing Variability in Anatomical Definitions Over Time Using Longitudinal Diffeomorphic Mapping In Spectral and Shape Analysis in Medical Imaging: First International Workshop, Conjunction with MICCAI 2016, pp.51-2016, 2016. ,
ASIFT: A New Framework for Fully Affine Invariant Image Comparison, SIAM Journal on Imaging Sciences, vol.2, issue.2, pp.438-469, 2009. ,
DOI : 10.1137/080732730
Radiation dose in computed tomography of the heart, Circulation, vol.107, issue.6, pp.917-922, 2003. ,
Cardiac magnetic resonance imaging and its electrocardiographs (ECG): tips and tricks. The international journal of cardiovascular imaging, pp.1465-1475, 2012. ,
Mathematical model of geometry and fibrous structure of the heart, American Journal of Physiology-Heart and Circulatory Physiology, vol.260, issue.4, pp.1365-1378, 1991. ,
Medical Image Segmentation Methods, Algorithms, and Applications, IETE Technical Review, vol.22, issue.1, pp.199-213, 2014. ,
DOI : 10.1007/978-3-642-12304-7_64
Automatic basal slice detection for cardiac analysis, Journal of Medical Imaging, vol.3, issue.3, pp.34004-034004 ,
DOI : 10.1117/1.JMI.3.3.034004
4D- CT imaging of a volume influenced by respiratory motion on multi-slice CT, Medical physics, vol.31, issue.2, pp.333-340, 2004. ,
Deformable models with parameter functions for cardiac motion analysis from tagged MRI data, IEEE Transactions on Medical Imaging, vol.15, issue.3, pp.278-289, 1996. ,
DOI : 10.1109/42.500137
Gated myocardial perfusion SPECT: basic principles, technical aspects, and clinical applications, Journal of nuclear medicine technology, vol.32, issue.16, pp.179-187, 2004. ,
Haar-like features with optimally weighted rectangles for rapid object detection, Pattern Recognition, vol.43, issue.1, pp.160-172, 2010. ,
DOI : 10.1016/j.patcog.2009.05.011
Regressing Heatmaps for Multiple Landmark Localization Using CNNs, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.230-238, 2016. ,
Radiation exposure from CT scans in childhood and subsequent risk of leukaemia and brain tumours: a retrospective cohort study, The Lancet, vol.380, issue.9840, pp.499-505, 2012. ,
Scikitlearn: Machine Learning in Python, Journal of Machine Learning Research, vol.12, pp.2825-2830, 2011. ,
URL : https://hal.archives-ouvertes.fr/hal-00650905
Understanding the â??demonâ??s algorithmâ??: 3D non-rigid registration by gradient descent, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.597-605, 1999. ,
Tracking brain deformations in time sequences of 3D US images, Pattern Recognition Letters, vol.24, issue.4-5, pp.801-813, 2003. ,
DOI : 10.1016/S0167-8655(02)00183-6
Clinical indications for cardiovascular magnetic resonance (CMR): Consensus Panel report, Journal of Cardiovascular Magnetic Resonance, vol.6, issue.4, pp.727-765, 2004. ,
Spatio-temporal free-form registration of cardiac MR image sequences, Medical Image Analysis, vol.9, issue.5, pp.441-456, 2005. ,
DOI : 10.1016/j.media.2005.05.004
Imaging in population science: cardiovascular magnetic resonance in 100,000 participants of UK Biobankrationale , challenges and approaches, Journal of Cardiovascular Magnetic Resonance, vol.15, issue.1, pp.46-2013, 2013. ,
A review of segmentation methods in short axis cardiac MR images, Medical Image Analysis, vol.15, issue.2, pp.169-184, 2011. ,
DOI : 10.1016/j.media.2010.12.004
URL : https://hal.archives-ouvertes.fr/hal-00551034
Flowing ConvNets for Human Pose Estimation in Videos, 2015 IEEE International Conference on Computer Vision (ICCV), pp.1913-1921, 2015. ,
DOI : 10.1109/ICCV.2015.222
Piecewise affine registration of biological images for volume reconstruction, Medical Image Analysis, vol.10, issue.3, pp.465-483, 2006. ,
DOI : 10.1016/j.media.2005.03.008
URL : https://hal.archives-ouvertes.fr/inria-00614996
Assessing aortic valve area in aortic stenosis by continuity equation: a novel approach using real-time three-dimensional echocardiography, European heart journal, vol.29, issue.20, pp.2526-2535, 2008. ,
Combined Volumetric and Surface Registration, IEEE Transactions on Medical Imaging, vol.28, issue.4, pp.508-522, 2009. ,
DOI : 10.1109/TMI.2008.2004426
Generation of Synthetic but Visually Realistic Time Series of Cardiac Images Combining a Biophysical Model and Clinical Images, IEEE Transactions on Medical Imaging, vol.32, issue.1, 2013. ,
DOI : 10.1109/TMI.2012.2220375
URL : https://hal.archives-ouvertes.fr/hal-00813861
Parallel transport in diffeomorphisms distinguishes the time-dependent pattern of hippocampal surface deformation due to healthy aging and the dementia of the Alzheimer's type, NeuroImage, vol.40, issue.1, pp.68-76, 2008. ,
DOI : 10.1016/j.neuroimage.2007.11.041
Principal component based diffeomorphic surface mapping, IEEE transactions on medical imaging, vol.31, issue.2, pp.302-311, 2012. ,
Construction of a Cardiac Motion Atlas from MR Using Non-rigid Registration, International Workshop on Functional Imaging and Modeling of the Heart, pp.141-150, 2003. ,
DOI : 10.1007/3-540-44883-7_15
Cardiac catheterisation guided by MRI in children and adults with congenital heart disease, The Lancet, vol.362, issue.9399, pp.1877-1882, 2003. ,
DOI : 10.1016/S0140-6736(03)14956-2
The normal heart, American Heart Journal, vol.23, issue.4, pp.455-467, 1942. ,
DOI : 10.1016/S0002-8703(42)90291-6
Rigid registration of 3-D ultrasound with MR images: a new approach combining intensity and gradient information, IEEE Transactions on Medical Imaging, vol.20, issue.10, pp.1038-1049, 2001. ,
DOI : 10.1109/42.959301
URL : https://hal.archives-ouvertes.fr/cea-00333699
Combination of Polyaffine Transformations and Supervised Learning for the Automatic Diagnosis of LV Infarct, International Workshop on Statistical Atlases and Computational Models of the Heart, pp.190-198, 2015. ,
DOI : 10.1007/11752790_2
Highly reduced model of the cardiac function for fast simulation, 2016 IEEE 12th Image, Video, and Multidimensional Signal Processing Workshop (IVMSP), pp.1-5 ,
DOI : 10.1109/IVMSPW.2016.7528214
Barycentric Subspace Analysis: A New Symmetric Group-Wise Paradigm for Cardiac Motion Tracking, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.300-307, 0118. ,
DOI : 10.1007/978-3-642-22092-0_53
Low- Dimensional Representation of Cardiac Motion Using Baryncetric Subspaces: Bibliography a New Group-Wise Paradigm for Estimation, Analysis, and Reconstruction. Medical image analysis, accepted subject to minor revisions ,
Segmentation of three-dimensional images using non-rigid registration: Methods and validation with application to confocal microscopy images of bee brains, Medical Imaging 2003 International Society for Optics and Photonics, pp.363-374, 2003. ,
Volume-preserving nonrigid registration of MR breast images using free-form deformation with an incompressibility constraint, IEEE Transactions on Medical Imaging, vol.22, issue.6, pp.730-741, 2003. ,
DOI : 10.1109/TMI.2003.814791
Evaluation of atlas selection strategies for atlas-based image segmentation with application to confocal microscopy images of bee brains, NeuroImage, vol.21, issue.4, pp.1428-1442, 2004. ,
DOI : 10.1016/j.neuroimage.2003.11.010
U-Net: Convolutional Networks for Biomedical Image Segmentation, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.234-241, 2015. ,
DOI : 10.1007/978-3-319-24574-4_28
Detection of Coronary Artery Stenoses With Thin-Slice Multi-Detector Row Spiral Computed Tomography and Multiplanar Reconstruction, Circulation, vol.107, issue.5, pp.664-666, 2003. ,
DOI : 10.1161/01.CIR.0000055738.31551.A9
Overview and recent advances in partial least squares In Subspace, latent structure and feature selection, pp.97-110, 2006. ,
Building and using a statistical 3D motion atlas for analyzing myocardial contraction in MRI, Medical Imaging, pp.253-264, 2004. ,
Nonrigid registration using free-form deformations: application to breast MR images, IEEE Transactions on Medical Imaging, vol.18, issue.8, pp.712-721, 1999. ,
DOI : 10.1109/42.796284
Automatic Construction of 3D Statistical Deformation Models Using Non-rigid Registration, Medical Image Computing and Computer-Assisted Intervention?MICCAI 2001, pp.77-84, 2001. ,
DOI : 10.1007/3-540-45468-3_10
Non-rigid registration using free-form deformations, Handbook of Biomedical Imaging, pp.277-294, 2015. ,
DOI : 10.1007/978-0-387-09749-7_15
Ingela Schnittgeret al. Recommendations for quantitation of the left ventricle by two-dimensional echocardiography, Journal of the American Society of Echocardiography, vol.2, issue.5, pp.358-367, 1989. ,
Charles Truwitet al. A generic framework for non-rigid registration based on non-uniform multi-level free-form deformations, Medical image computing and computer-assisted intervention?MICCAI 2001, pp.573-581, 2001. ,
Advances and challenges in deformable image registration: From image fusion to complex motion modelling, 2016. ,
CT of the heart: principles, advances, 2005. ,
Radiation exposure during midfacial imaging using 4-and 16-slice computed tomography, cone beam computed tomography systems and conventional radiography, Dentomaxillofacial Radiology, p.2014, 2014. ,
Capturing the multiscale anatomical shape variability with polyaffine transformation trees, Medical Image Analysis, vol.16, issue.7, pp.1371-1384, 2012. ,
DOI : 10.1016/j.media.2012.05.011
URL : https://hal.archives-ouvertes.fr/hal-00813866
LISA: Longitudinal image registration via spatio-temporal atlases, 2012 9th IEEE International Symposium on Biomedical Imaging (ISBI), pp.334-337, 2012. ,
DOI : 10.1109/ISBI.2012.6235552
Efficient MRF deformation model for non-rigid image matching, Computer Vision and Image Understanding, vol.112, issue.1, pp.91-99, 2008. ,
DOI : 10.1016/j.cviu.2008.06.006
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.212.7250
Automatic Segmentation of Different Pathologies from Cardiac Cine MRI Using Registration and Multiple Component EM Estimation, International Conference on Functional Imaging and Modeling of the Heart, pp.163-170, 2011. ,
DOI : 10.1016/j.media.2010.05.009
A comprehensive cardiac motion estimation framework using both untagged and 3-D tagged MR images based on nonrigid registration, IEEE transactions on medical imaging, vol.31, issue.6, pp.1263-1275, 2012. ,
Semantic texton forests for image categorization and segmentation, 2008 IEEE Conference on Computer Vision and Pattern Recognition, pp.1-8, 2008. ,
DOI : 10.1109/CVPR.2008.4587503
A Deep Metric for Multimodal Registration, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.10-18, 2016. ,
DOI : 10.1109/CVPR.2015.7299064
URL : https://hal.archives-ouvertes.fr/hal-01576914
Alzheimerâ??s Disease Neuroimaging Initiativeet al. Probabilistic non-linear registration with spatially adaptive regularisation, Medical image analysis, vol.26, issue.1, pp.203-216, 2015. ,
Accurate, robust, and automated longitudinal and cross-sectional brain change analysis, Neuroimage, vol.17, issue.1, pp.479-489, 2002. ,
Automated Identification of Infarcted Myocardium Tissue Characterisation Using Ultrasound Images: A Review, IEEE Reviews in Biomedical Engineering, p.2013, 2013. ,
A collaborative resource to build consensus for automated left ventricular segmentation of cardiac MR images, Medical Image Analysis, vol.18, issue.1, pp.50-62, 2014. ,
DOI : 10.1016/j.media.2013.09.001
URL : https://hal.archives-ouvertes.fr/hal-00857223
Quantification of LV function and mass by cardiovascular magnetic resonance: multi-center variability and consensus contours, Journal of Cardiovascular Magnetic Resonance, vol.30, issue.1, pp.63-2015, 2015. ,
DOI : 10.1097/00004728-200605000-00013
Statistical shape modeling of the left ventricle: myocardial infarct classification challenge, IEEE Journal of Biomedical and Health Informatics, p.2017, 2017. ,
DOI : 10.1109/JBHI.2017.2652449
URL : https://hal.archives-ouvertes.fr/hal-01533805
Motion analysis with quadrature filter based registration of tagged MRI sequences, International Workshop on Statistical Atlases and Computational Models of the Heart, pp.78-87, 2011. ,
Image matching as a diffusion process: an analogy with Maxwell's demons, Medical Image Analysis, vol.2, issue.3, pp.243-260, 1998. ,
DOI : 10.1016/S1361-8415(98)80022-4
Benchmarking framework for myocardial tracking and deformation algorithms: An open access database, Medical Image Analysis, vol.17, issue.6, pp.632-648 ,
DOI : 10.1016/j.media.2013.03.008
URL : https://hal.archives-ouvertes.fr/hal-00855928
Multi-way metamodelling facilitates insight into the complex input-output maps of nonlinear dynamic models, BMC Systems Biology, vol.6, issue.1, pp.88-2012, 2012. ,
DOI : 10.1016/S0169-7439(97)00032-4
Textbook of cardiovascular medicine, 2007. ,
Cardiovascular disease in Europe: epidemiological update 2016, European Heart Journal, vol.37, issue.42, 2016. ,
DOI : 10.1093/eurheartj/ehw334
Interpretation of variable importance in Partial Least Squares with Significance Multivariate Correlation (sMC) Chemometrics and Intelligent Laboratory Systems, pp.153-160, 2014. ,
Direct Evidence that Left Ventricular Myocardium Is Incompressible Throughout Systole and Diastole, The Tohoku Journal of Experimental Medicine, vol.132, issue.1, pp.119-120, 1980. ,
DOI : 10.1620/tjem.132.119
Time continuous tracking and segmentation of cardiovascular magnetic resonance images using multidimensional dynamic programming, Investigative radiology, vol.41, issue.1, pp.52-62, 2006. ,
Statistics on diffeomorphisms via tangent space representations, NeuroImage, vol.23, pp.161-169, 2004. ,
DOI : 10.1016/j.neuroimage.2004.07.023
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.132.6802
Surface Matching via Currents, Biennial International Conference on Information Processing in Medical Imaging, pp.381-392, 2005. ,
DOI : 10.1007/11505730_32
URL : https://hal.archives-ouvertes.fr/hal-00263652
Comparison between manual and semiautomated analysis of left ventricular volume parameters from short-axis MR images, Journal of computer assisted tomography, vol.21, issue.5, pp.756-765, 1997. ,
Ghassan Hamarneh and Daniel Cohen-Or. A survey on shape correspondence, Computer Graphics Forum, pp.1681-1707, 2011. ,
Aymeric Perchant and Nicholas Ayache Symmetric log-domain diffeomorphic registration: A demons-based approach, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.754-761, 2008. ,
Alignment by maximization of mutual information, International journal of computer vision, vol.24, issue.2, pp.137-154, 1997. ,
Cardiac motion and deformation recovery from MRI: a review, IEEE Transactions on Medical Imaging, vol.31, issue.2, pp.487-503, 2012. ,
Razvan Ionasec, Yefeng Zheng and Dorin Comaniciu. Learning-based detection and tracking in medical imaging: a probabilistic approach, Deformation Models, pp.209-235, 2013. ,
Analytic signal phase-based myocardial motion estimation in tagged MRI sequences by a bilinear model and motion compensation, Medical Image Analysis, vol.24, issue.1, pp.149-162, 2015. ,
DOI : 10.1016/j.media.2015.06.005
First evidence of depressed contractility in the border zone of a human myocardial infarction. The Annals of thoracic surgery, pp.1188-1193, 2012. ,
PLS-regression: a basic tool of chemometrics. Chemometrics and intelligent laboratory systems, pp.109-130, 2001. ,
Automated abdominal multi-organ segmentation with subject-specific atlas generation, IEEE transactions on medical imaging, vol.32, issue.9, pp.1723-1730 ,
Image segmentation using deformable models. Handbook of medical imaging, pp.129-174, 2000. ,
DOI : 10.1117/3.831079.ch3
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.128.3125
Fast Predictive Image Registration In International Workshop on Large-Scale Annotation of Biomedical Data and Expert Label Synthesis, pp.48-57, 2016. ,
Automatic three-dimensional mesh generation by the modified-octree technique, International Journal for Numerical Methods in Engineering, vol.20, issue.11, pp.1965-1990, 1984. ,
A cubic B-spline-based hybrid registration of lung CT images for a dynamic airway geometric model with large deformation, Physics in Medicine and Biology, vol.56, issue.1, p.203, 2010. ,
DOI : 10.1088/0031-9155/56/1/013
Model tags: direct three-dimensional tracking of heart wall motion from tagged magnetic resonance images, Medical image analysis, vol.3, issue.4, pp.361-372, 1999. ,
Human heart: tagging with MR imaging?a method for noninvasive assessment of myocardial motion, Radiology, vol.169, issue.1, pp.59-63, 1988. ,
A novel kernelized fuzzy cmeans algorithm with application in medical image segmentation, Artificial intelligence in medicine, vol.32, issue.1, pp.37-50, 2004. ,
Spatio-temporal registration of real time 3D ultrasound to cardiovascular MR sequences. Medical Image Computing and Computer-Assisted Intervention?MICCAI, pp.343-350, 2007. ,
Orthogonal Shape Modes Describing Clinical Indices of Remodeling, Functional Imaging and Modeling of the Heart, 2015. ,
DOI : 10.1007/978-3-319-20309-6_32
Low-Dimensional Statistics of Anatomical Variability via Compact Representation of Image Deformations, International Conference on Medical Image Computing and Computer-Assisted Intervention, pp.166-173, 2016. ,
DOI : 10.1007/978-3-319-19992-4_19
A coupled deformable model for tracking myocardial borders from real-time echocardiography using an incompressibility constraint, Medical Image Analysis, vol.14, issue.3, pp.429-448, 2010. ,
DOI : 10.1016/j.media.2010.02.005
Image registration methods: a survey, Image and vision computing, vol.21, issue.11, pp.977-1000, 2003. ,