CIDANE: Comprehensive Isoform Discovery and Abundance Estimation

Abstract : High-throughput sequencing of cellular RNA (RNA-seq) allows to assess the set of all RNA molecules, the transcriptome, produced by a cell at a high resolution, under various conditions. The assembly of short sequencing reads to full-length transcripts, however, poses profound challenges to bioinformatics tools.
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https://hal.inria.fr/hal-01248849
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Submitted on : Tuesday, December 29, 2015 - 7:40:59 AM
Last modification on : Wednesday, February 27, 2019 - 11:08:02 AM

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Stefan Canzar, Andreotti Sandro, David Weese, Reinert Knut, Klau Gunnar. CIDANE: Comprehensive Isoform Discovery and Abundance Estimation. Research in Computational Molecular Biology (RECOMB), Apr 2015, Warsaw, Poland. pp.60-84, ⟨10.1007/978-3-319-16706-0_8⟩. ⟨hal-01248849⟩

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