Superclusteroid 2.0: A Web Tool for Processing Big Biological Networks

Abstract : Biological networks have been the most prevalent model to analyze the complexity of cellular mechanisms. The expansion of the existing knowledge on known intracellular players such as genes, RNA molecules and proteins as long as the continued study on their interactions has increased lately the ability to construct big biological networks of increased complexity. Many web tools have been introduced in the last decade but they are incomplete, as they do not provide all required features for a full research study neither they can handle the big and complex nature of these networks and the increased needs of researchers for fast and uninterrupted analysis. In the present paper, the new version of the Superclusteroid tool is presented which includes among others new visualization features, network comparison tools and new clustering algorithms. Moreover, a new strategy is proposed to deal with the necessity of handling effectively the increased work load of the tool as long as to improve the speed in the two most time consuming steps: network visualization and network clustering.
Type de document :
Communication dans un congrès
Lazaros Iliadis; Ilias Maglogiannis. 12th IFIP International Conference on Artificial Intelligence Applications and Innovations (AIAI), Sep 2016, Thessaloniki, Greece. IFIP Advances in Information and Communication Technology, AICT-475, pp.623-633, 2016, Artificial Intelligence Applications and Innovations. 〈10.1007/978-3-319-44944-9_55〉
Liste complète des métadonnées

Littérature citée [28 références]  Voir  Masquer  Télécharger

https://hal.inria.fr/hal-01557642
Contributeur : Hal Ifip <>
Soumis le : jeudi 6 juillet 2017 - 13:55:37
Dernière modification le : mardi 26 décembre 2017 - 16:40:06

Fichier

 Accès restreint
Fichier visible le : 2019-01-01

Connectez-vous pour demander l'accès au fichier

Licence


Distributed under a Creative Commons Paternité 4.0 International License

Identifiants

Citation

Maria Tserirzoglou-Thoma, Konstantinos Theofilatos, Eleni Tsitsouli, Georgios Panges-Tserres, Christos Alexakos, et al.. Superclusteroid 2.0: A Web Tool for Processing Big Biological Networks. Lazaros Iliadis; Ilias Maglogiannis. 12th IFIP International Conference on Artificial Intelligence Applications and Innovations (AIAI), Sep 2016, Thessaloniki, Greece. IFIP Advances in Information and Communication Technology, AICT-475, pp.623-633, 2016, Artificial Intelligence Applications and Innovations. 〈10.1007/978-3-319-44944-9_55〉. 〈hal-01557642〉

Partager

Métriques

Consultations de la notice

32