A Generic Solution for Automated Collecting and Integration of Biological Data from Web Sources

Marie-Dominique Devignes 1 Yvan Norsa 1 Malika Smaïl-Tabbone 1 Philippe Collet 2 Lionel Domenjoud 2 Michel Dauça 2
1 ORPAILLEUR - Knowledge representation, reasonning
INRIA Lorraine, LORIA - Laboratoire Lorrain de Recherche en Informatique et ses Applications
2 UHP - Université Henri Poincaré - Nancy 1
Abstract : We present here a work dealing with automated collecting and integration of data along a user-defined scenario. Aspects such as query construction, query submission, parsing of returned document, filtering of desired data and storing them in a structured document have been considered as well as the chaining between the various steps of the scenario. Automation of the process allows to refresh the data in a time-saving manner in order to take into account the frequent changes in source contents. A configuration module distinct from the execution module allows to modify the scenario steps according to user preferences and/or source changes.
Mots-clés : intégration de sources de données hétérogènes xml structured document integration of heterogeneous databases source multiplicity web genomic sources génomique scénario xml
Document type :
Conference papers
Complete list of metadatas

Cited literature [2 references]  Display  Hide  Download
https://hal.inria.fr/inria-00107665
Contributor : Publications Loria <>
Submitted on : Thursday, October 19, 2006 - 9:04:21 AM
Last modification on : Thursday, January 11, 2018 - 6:19:53 AM
Long-term archiving on : Friday, November 25, 2016 - 1:04:49 PM

File

A03-R-152.pdf

Identifiers

  • HAL Id : inria-00107665, version 1

Collections

INRIA | LORIA | UNIV-LORRAINE

Citation

Marie-Dominique Devignes, Yvan Norsa, Malika Smaïl-Tabbone, Philippe Collet, Lionel Domenjoud, et al.. A Generic Solution for Automated Collecting and Integration of Biological Data from Web Sources. European Conference on Computational Biology - ECCB'03, Sep 2003, Paris, France. pp.2. ⟨inria-00107665⟩

Export

BibTeX TEI DC DCterms EndNote

Share

Metrics

Record views

412

Files downloads

54

Contact


archive-ouverte@inria.fr