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Article Dans Une Revue Genome Biology and Evolution Année : 2024

High-Quality Genome Assemblies of 4 Members of the Podospora anserina Species Complex

S Lorena Ament-Velásquez
Aaron A Vogan
Ola Wallerman
  • Fonction : Auteur
Fanny E Hartmann
Tatiana Giraud
Hanna Johannesson

Résumé

The filamentous fungus Podospora anserina is a model organism used extensively in the study of molecular biology, senescence, prion biology, meiotic drive, mating-type chromosome evolution, and plant biomass degradation. It has recently been established that P. anserina is a member of a complex of 7 closely related species. In addition to P. anserina, high-quality genomic resources are available for 2 of these taxa. Here, we provide chromosome-level annotated assemblies of the 4 remaining species of the complex, as well as a comprehensive data set of annotated assemblies from a total of 28 Podospora genomes. We find that all 7 species have genomes of around 35 Mb arranged in 7 chromosomes that are mostly collinear and less than 2% divergent from each other at genic regions. We further attempt to resolve their phylogenetic relationships, finding significant levels of phylogenetic conflict as expected from a rapid and recent diversification.
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Dates et versions

hal-04553106 , version 1 (19-04-2024)

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S Lorena Ament-Velásquez, Aaron A Vogan, Ola Wallerman, Fanny E Hartmann, Valérie Gautier, et al.. High-Quality Genome Assemblies of 4 Members of the Podospora anserina Species Complex. Genome Biology and Evolution, 2024, 16 (3), pp.evae034. ⟨10.1093/gbe/evae034⟩. ⟨hal-04553106⟩
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