Skip to Main content Skip to Navigation
Journal articles

A New Software Package for Predictive Gene Regulatory Network Modeling and Redesign

Abstract : The efficacy of a newly created software package for predictive modeling of developmental gene regulatory networks (GRNs) has recently been demonstrated (Peter et al., 2012). The program GeNeTool computes spatial gene expression patterns based on GRN interactions and thereby allows the direct comparison of predicted and observed spatial expression patterns. GeNeTool also permits in silico exploration of both cis-and trans-perturbations of GRN interactions. Here, we present this program, review briefly its major features and applications, and provide a detailed and accessible tutorial.
Document type :
Journal articles
Complete list of metadata

Cited literature [5 references]  Display  Hide  Download

https://hal.inria.fr/hal-01101032
Contributor : Christophe Godin <>
Submitted on : Wednesday, January 7, 2015 - 4:39:04 PM
Last modification on : Monday, January 4, 2021 - 1:02:22 PM
Long-term archiving on: : Wednesday, April 8, 2015 - 12:30:25 PM

File

Faure-JCB-2013.pdf
Files produced by the author(s)

Identifiers

Collections

Citation

Emmanuel Faure, Isabelle Peter, Eric H Davidson. A New Software Package for Predictive Gene Regulatory Network Modeling and Redesign. Journal of Computational Biology, Mary Ann Liebert, 2013, pp.5. ⟨10.1089/cmb.2012.0297⟩. ⟨hal-01101032⟩

Share

Metrics

Record views

291

Files downloads

465